Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1746 ATGCATATTTCTGGCCACATGATCTTTCTAGTAACGACTTCTCTGTCTCAGTTTTTGTATAGGCACGGAATGGTTGTCCAAATAAAAAGGGATATTCTCTTGCATACCTTCTTTTTGTGCTCTTTGCTCAGTATCTTAATGATAAGTCATGGTACTGAGACTGATATCTTGTGTTTAAAATCCATTAAGAATTCCTTCGAAGACCCAAATAATTACTTAACCTCGAGCTGGAACTTCTACAACAATACCGAAGGTTACATATGTAAATTCAATGGTGTTGAATGTTGGCATCCTGATGAGAATAGAGTACTAAATCTCAAACTATCGAACATGGGATTGAAGGGCAAGTTTCCGCGGGGAATTGTGAATTGCACTACGTTGACAGGATTAGATCTTTCAGTCAACGACCTTTCAGGACCCATTCCATCTGATATATCAGAAATACTCAGATTTGTTACCACCATTGATCTCTCTTATAACAGATTCACCGGTGAAATTCCAACAACTTTAGCAAATTGCACATACCTGAATACTATTAAACTTGACAACAATATGCTAACAGGTGAAATTCCAAAAGAAATCGGCACTCTTACGAGGATTAAAACGATTTCCTTTTCTAACAATCAATTGTATGGGCAAGTGCCAATGTTCGTCATGTTCGTAAACGTTAACTATGCTAACAATAGAGGACTTTGTGGAGGGTCTTTGAGACCATGCTCCTTGACACGTGACAAGCAAGACGATTTCCATCAATCGTTCAAAGGTGGTCTTATTATTGGTTATGTTTTTTCTTTCATTTTTTCTGTTATGATCACTTGTATGTTCTACTCCAAATGTGCACATTGGGTGCATCAATTGAAAAAGAGAAAAAACATTCCCCTAAACAAAGCTAAAGAATTGGGCAAATATGTTTGCTCCATCACAAGCAGGAGGACACGGACGGTAGTTAATCAGATGCATGAACTGTTAAATTCACAGATTGTACACAACGAAACAAAAGAGATCTCTGTACTATTGGAAAGTCTGATATCAACAATATGGTTAGAAGAACTGCGTGATGCAACTGACTGTTTCGCTATGGACAATGCCATCGGTGTAGGAAAGATGGGAATGATGTACCAAGGATTTCTGCCTAATGGTCAGTTACTAGCTGTTAAGAGACTATTTGACTCTTGCTTATTTAAACGGCAATTCCTTTTGGAAACAGCGATTTTGTGTAGGTACAAACACAAAAATATAGTTCCCCTGCTTGGGTTTTGCATTGAAGAAAAGGAAAGGCTTTTGGCATATGCATACATGTCAAATGGAAGGCTTTCCAAATGGTTACATCCTTTGGAAAGTGAAGTCATAAGATTGAAATGGCATGATAGGATCAACATTGCACTTGGAATAGCAAGAGGCTTAGCATGGCTACATCATACATGTGATTCAGGCATAGTGCATTTTAACATATGTTCAGAATGCATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACACTGAAGATCATCTAGGCACGATGTTTAAAGTGAATGATGGGAAGAAGGATGTCTATGACTTTGGAAGTGTGCTTTTTGAATTGATGACGGGGAAAACATATAATGAATTGTCGCGTTCATATGATACTTCTGATTTATGTGCCAACCCTTTGAGTTTCTATAATGTAATTGATAAATCTGTGACAGGGGAAGGACTTGAAAATGAAGTTTGTACTCTCCTAAAGATTGCTTGCGAGTGTGTTAAGCCTTTATCAAACCAAAGGCCAACAATGGTTGAAGTTTATAACAATATGAGCAATGTAAGGAAGGGGAAAAATGACTTGGTTAATGATTCTGACACATTAAGGGGATTAGAATATGCTTCCTCTATTACTATAGACGAAATTGTTGAGTTTTAA 1932 0.3722 MHISGHMIFLVTTSLSQFLYRHGMVVQIKRDILLHTFFLCSLLSILMISHGTETDILCLKSIKNSFEDPNNYLTSSWNFYNNTEGYICKFNGVECWHPDENRVLNLKLSNMGLKGKFPRGIVNCTTLTGLDLSVNDLSGPIPSDISEILRFVTTIDLSYNRFTGEIPTTLANCTYLNTIKLDNNMLTGEIPKEIGTLTRIKTISFSNNQLYGQVPMFVMFVNVNYANNRGLCGGSLRPCSLTRDKQDDFHQSFKGGLIIGYVFSFIFSVMITCMFYSKCAHWVHQLKKRKNIPLNKAKELGKYVCSITSRRTRTVVNQMHELLNSQIVHNETKEISVLLESLISTIWLEELRDATDCFAMDNAIGVGKMGMMYQGFLPNGQLLAVKRLFDSCLFKRQFLLETAILCRYKHKNIVPLLGFCIEEKERLLAYAYMSNGRLSKWLHPLESEVIRLKWHDRINIALGIARGLAWLHHTCDSGIVHFNICSECILLDENFEPKISNFGEAKFMNPNTEDHLGTMFKVNDGKKDVYDFGSVLFELMTGKTYNELSRSYDTSDLCANPLSFYNVIDKSVTGEGLENEVCTLLKIACECVKPLSNQRPTMVEVYNNMSNVRKGKNDLVNDSDTLRGLEYASSITIDEIVEF* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1746 643 SUPERFAMILY Protein kinase-like (PK-like) 338 607 IPR011009 -
Tpr3g1746 643 SUPERFAMILY L domain-like 52 231 - -
Tpr3g1746 643 Coils Coil 643 643 - -
Tpr3g1746 643 ProSiteProfiles Protein kinase domain profile. 358 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1746 643 Pfam Protein tyrosine and serine/threonine kinase 360 608 IPR001245 GO:0004672|GO:0006468
Tpr3g1746 643 Gene3D Ribonuclease Inhibitor 52 240 IPR032675 -
Tpr3g1746 643 Gene3D Transferase(Phosphotransferase) domain 1 433 627 - -
Tpr3g1746 643 Gene3D Phosphorylase Kinase; domain 1 317 432 - -
Tpr3g1746 643 PANTHER RECEPTOR-LIKE PROTEIN 55 30 612 - -
Tpr3g1746 643 Pfam Leucine rich repeat N-terminal domain 54 96 IPR013210 -
Tpr3g1746 643 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 30 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1746 Tpr-Chr3 15471125 15475229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1746 38 624 Receptor kinase-like Gene Family AT3G28450 33.442 2.38e-101 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Tpr3g1746 PK_Tyr_Ser-Thr 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1746 - - mtr:MTR_4g092520 807.749