Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1728 ATGATGGACTCTTTACTAACTTGTTCTCAAAGCCTCAAGGGATATGACCTGACAAAACAAAAGAATCCTTGCTATTCTCGTGCTGCTTCGCGAATTTGTTCGAATTCTATGTTTACTCTTTCATCAGTTGACAAGCAAGTTCCTATTACATCACATATATGTTGTCATAGTACAGCTTTATCAGATAAATTCACCAGAAGAACGTCTCTGGATGTTCCTTCGTTTGGTGGTCGGAAATTATCCTATTTCTCTAAGTATAGGTCACTACAATGGGAAAGGTTGCGTAGAAGTGCGACATATGATGTTGCTGGTGCTGTTGAAGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCAGTTACCGTCTTTATCGTCCCCTCGTTCAAGTTAATTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGGGTGGTGCTTAATCAATTTGGTTTAATTAGGAACCTTGAAGATGTTAAAGTTTTGTCTGAGTGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAACTTTCACTAGCACGTCTTAAAGCTCTTGCAAAATATGCCTTTGGAATGGGATTGGCTCAGGTTTTACTATCTACTTTAGCATTCACTGCTTTTGAGCTTCCACCAAATGGGGCTGTTGGAACAAAAATTTTGGAATTTCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGAAGTATTGATGAAGCTGTAGTGATTGGGGCTGCTCTCTCTCTGTCATCATCTGCATTTGTTTTACAGCTTCTTGCAGAGAAAGGCGAGCTTCCTACGAGGCTCGGTTCAGCAACTCTTGGGATACTTCTTTTACAGGACATAGCTGTTGTGCCTCTTTTGGTCATACTTCCAGTACTTGAGAGCCAGAATATGACTGAGGGAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGTCTGCTTTCTTTTGGAGCAAAGTTTTTTCTCAGAAGAGTTTTTGAGGTTGTAGCAGATACAAGAAGTTCAGAGGCTTTTGTCGCTCTTTGCTTGCTAACTATTGCTGGGACTTCACTAATCACACAGAAATTGGGCTTCAGTGACACGCTTGGAGCATTTTTAGCTGGGGCAATCCTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTTCTCGGGTTGTTTTTTCTAACTACAGGGACTTCAATTGACATGCAGGTTCTCTTGAGAGAGTGGCCAAATGTACTTGCGCTCTTGGCGGGTTTAATTACTATCAAGACATTGATTATAACTGCGATTGGTCCTCGTGTTGGCCTTACTTTAAAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGAGAGTTTGGATTTGTAGTATTCTCTTTGGCGAATAGTCTTGGGGTGCTTCCACTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCGTTAACCCCATTTCTGAATGAAGCTGGACGGAGGGCTGCTAGCTTTATTGAAGACAATTATGAAGCTGAGGATAAAGAGAAAGATTCTGAGATGATTAACTTTGAAGTTAATGAACCTGTTGTCGTCCTTGGATTTGGACAAATGGGGCAGGTCCTTGCCAATTTGCTGTCCAACCCAATGGCTTCAGGAGGAGATAGTGAAGGAATAGGCTGGCCTTATGTGGCATTTGATATTGACCCCAGGGTTGTAAAGGCAGCTAGAAAACAAGGTTTTCCTATTCTCTACGGGGATGGATCACGTCCAGCTGTTCTTCAATCTGCCGGTATCTCTTCTCCAAAAGCTATCATGATTATGCTCACTGAGAAGGCGAAGTCAATTGAAGCTGTTCAGAGGCTACGACTGGCTTTTCCTGCAGTTCCAATATACGCCAGAGCTAGAGATCTAAAACATCTTTTAGATCTGAAGAAAGCAGGTGCAACGGATGCTACTTTGGAAAAGGCTGAGACTAGCTTACAACTTGGTTCTAAGATGCTGAAAGGCCTTGGGATGATGTCCGATGATGTATCATTTTTGAGTCAGCTTGTTAGAGATTCTATGGAACTACAAGCTGAAGAAGCAAACAGCCAACGAGAATATCGGGAATCAACTATTATGGAACCATTGCAGGTGAGAGTTTCTGACATAAGGGGGCCACGCATTCCGGTGGCAACTACTACACCAAACTCTGAATTATCAGTACAGAACCAGATAGATCAAGCTTCATTGAGCACAATTCAGAAGGAAGCAGATCCTGAAGAACAAGATTATGAGCTAAATCAAGCTGTTAAATTAGAAGGAAACGGCACTTCATATAGCAAACAAGATATTGAAGAAAGCTCAGCGGTTGGATCTCAAGATGATTTAGGCAATTAA 2403 0.4186 MMDSLLTCSQSLKGYDLTKQKNPCYSRAASRICSNSMFTLSSVDKQVPITSHICCHSTALSDKFTRRTSLDVPSFGGRKLSYFSKYRSLQWERLRRSATYDVAGAVEVINDLGLDTLTFLAVTVFIVPSFKLIKASPILGFFCAGVVLNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVLLSTLAFTAFELPPNGAVGTKILEFLFHSRSDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRLGSATLGILLLQDIAVVPLLVILPVLESQNMTEGSIWPMLAQESLKALGGLGLLSFGAKFFLRRVFEVVADTRSSEAFVALCLLTIAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQVLLREWPNVLALLAGLITIKTLIITAIGPRVGLTLKESVRIGLLLSQGGEFGFVVFSLANSLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDNYEAEDKEKDSEMINFEVNEPVVVLGFGQMGQVLANLLSNPMASGGDSEGIGWPYVAFDIDPRVVKAARKQGFPILYGDGSRPAVLQSAGISSPKAIMIMLTEKAKSIEAVQRLRLAFPAVPIYARARDLKHLLDLKKAGATDATLEKAETSLQLGSKMLKGLGMMSDDVSFLSQLVRDSMELQAEEANSQREYRESTIMEPLQVRVSDIRGPRIPVATTTPNSELSVQNQIDQASLSTIQKEADPEEQDYELNQAVKLEGNGTSYSKQDIEESSAVGSQDDLGN* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1728 800 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 537 675 IPR036291 -
Tpr3g1728 800 MobiDBLite consensus disorder prediction 772 800 - -
Tpr3g1728 800 Gene3D - 111 510 IPR038770 -
Tpr3g1728 800 Gene3D - 536 706 - -
Tpr3g1728 800 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 49 761 - -
Tpr3g1728 800 Pfam TrkA-N domain 537 659 IPR003148 GO:0006813
Tpr3g1728 800 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 49 761 - -
Tpr3g1728 800 Pfam Sodium/hydrogen exchanger family 118 503 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr3g1728 800 ProSiteProfiles RCK N-terminal domain profile. 536 668 IPR003148 GO:0006813
Tpr3g1728 800 MobiDBLite consensus disorder prediction 773 800 - -
Tpr3g1728 800 Coils Coil 688 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1728 Tpr-Chr3 15303760 15313131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1728 6 726 Inorganic Solute Cotransporters AT4G04850 70.937 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1728 - - aprc:113858933 1198.34