Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1723 ATGGATACTTATCAATATCCACCGTCATATCCAGATTCCGGCAACTCATCGCCGCGTTCGAGAGAAATTGATTTCGATAATCCCTCCTCATGGGAGGAGCAACAGAATTACAAAGCAAAGTTCATGTGTAGTTACGGTGGAAAGATCCAACCACGCAGCCACGACAATCAACTTTCTTATATCGGGGGCGACACCAAAATACTAGCCGTCGATCGTAACATCAAGTTTCAAGCCTTTCTCTCGAAGCTATCCACTCTCTGCGACGCAATTCAACAAGATGTAACGTTCAAGTACCAACTTCCCGGTGAAGAACTCGATGCTCTTATCTCCGTTACAACTGAAGATGATCTTGAACATATGATGCATGAGTACGATCGTCTCTATCGTCCTTCTTCAAAACCGGTTAGAATGAGGCTTTTCATATTCATTTCTCCGAATTCGGGTTTGGTTTCGGTTTCTCAACCCGATCCACTTAAACCTCATTCCAACGCTGATTTTCTCTTTGGTACTCTTGATAACAAAACCATAGCTCCACCGTCTCATCCTCCTTCATATGCTGCTGCTGTGAAATATCATGATCCTGTGGCGGATCTTGTTGCTCCGGTAACTGAGTATCCGCCACGTGGAGTTGTTGATGAGAGTGTTGAGATTCAGAGGCAGTTACAGCGTTTGCAGGTTTCTGAGACTGAGCAGCAGAATTTGTATCGGAGAAGTGTAGATGGATTCACCGGAGGTTTTGCTGCTGCTGCTGCTACCGTTGCTCCTGGAGGTGAATATTACATGCAGAAGATGCCGGAGAAAGTTGCGTCGACGAATTCTCCAACTGCTGTTCATCATCCTGCAGGTTACTGGCCGGAAAAGCAATTTTCCGGCGAAGGTTTTCCGATGCCGGGGATAAATACTTCCGGTGGTGGGGATCAGCATGTTTACATGATGCAGCCACCGCCGGGGACATTCTACCACGCACCTCAGATGATGCGTCCACCGACAGCGCAGGTGAGTCAGGGGTATTACGCTGTGCAGCGAATGTCTACTGATGGATACCGGGAACAGCCGGTATATGGCGGCGTTCCGCCTCAGAGCGTGGCGTTTTCGTCTGCGGGTCAGGGGAGTTTGGCACCGGCTCAGCCGGTCAAACCTTCTGCTTATGCAGAAGGATATGGCTTAGTTAGGCCAGCTGGTGTAGCGGATAATGCGGGCAGTGGTGGATATGCGCAAGTGGCGTATGATAGTGCAAGTGGGAGACATGTTTATTATACTGCACCTGGAGGTGTGGTACATGCGCCGCAGTATCAAGGGGTTACTCCGGTATTCAGCAATGATATGAGAACGGCTGCAGTTCCTGTGGGCCAGGATCCTAAAGTGGTAAACAAAAGTTCACAAGGATCTGTGTGA 1395 0.4882 MDTYQYPPSYPDSGNSSPRSREIDFDNPSSWEEQQNYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRNIKFQAFLSKLSTLCDAIQQDVTFKYQLPGEELDALISVTTEDDLEHMMHEYDRLYRPSSKPVRMRLFIFISPNSGLVSVSQPDPLKPHSNADFLFGTLDNKTIAPPSHPPSYAAAVKYHDPVADLVAPVTEYPPRGVVDESVEIQRQLQRLQVSETEQQNLYRRSVDGFTGGFAAAAATVAPGGEYYMQKMPEKVASTNSPTAVHHPAGYWPEKQFSGEGFPMPGINTSGGGDQHVYMMQPPPGTFYHAPQMMRPPTAQVSQGYYAVQRMSTDGYREQPVYGGVPPQSVAFSSAGQGSLAPAQPVKPSAYAEGYGLVRPAGVADNAGSGGYAQVAYDSASGRHVYYTAPGGVVHAPQYQGVTPVFSNDMRTAAVPVGQDPKVVNKSSQGSV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1723 464 Gene3D - 59 143 - -
Tpr3g1723 464 PANTHER OS05G0427100 PROTEIN-RELATED 1 459 - -
Tpr3g1723 464 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Tpr3g1723 464 SUPERFAMILY CAD & PB1 domains 54 151 - -
Tpr3g1723 464 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 459 - -
Tpr3g1723 464 SMART PB1_new 53 144 IPR000270 GO:0005515
Tpr3g1723 464 CDD PB1_UP2 42 142 - -
Tpr3g1723 464 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1723 Tpr-Chr3 15275512 15276974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1723 37 145 MAP Kinase Kinase Kinase AT5G57610 42.202 8.66e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1723 - - adu:107480527 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1723 3 15275512 15276974 Tpr2g2541 2 30236426 30238507 PCT