Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1712 ATGACTCATTTGCATGTTAGTTTTCGCACTCGAACACTTGTTTTTTGTTATGCAATAGGAACCATTTCCACACTCCAAATAATCCATCTTGCAAACTCACTCTCATTTGATTACTCCAACTTTAAGAATGGTGATATCAATTGGGAAGGTGATGCTTCTCCTTATAAAGGAGCTATTCAACTCACTTCCAACACCATTGATCAAAACAACAACTATAGCATTGGTCGAGTCACGAGTTTTAAACAGATGCATCTCTGGGATATGAACTCTGGAAAACTCACCGACTTCACCACCAAATTTTCCTTTGTTGTTTTTTCAAAATCAAAGGATTATGGAGATGGAATGTCATTCTTCTTGGCTGATCCAAATCTCCCACTTTTGAAGAATATCAAAGAAGGTGGCGGTCTTGGCCTTGTGGATGGAGAACAAGTACTAAAATCAACTCAATACTCATTTGTGGCAGTAGAGTTTGACACCTTCAATAATCCATGGGACCCTTCAGGTGTAGGCACTCATGTTGGCTTGAATTTCAACTCTATGAGGTCTAACATAACTAAGCCATGGTTGACCAATATTATGAAATGGAGAGTTTACAATTGCAGCATTAAATACAATTCCAACACTCACAATTTGAGGGTGTCATTCACCATGTATGATCATGATGATAAACCAGTTAAAGAGCACATATCACATAAAGTTGATTTGAGAGATTTCTTACCTGAGAAGGTTATTGTCGGATTCTCTGCTGCAACAGGAGTATTCTATGAGGTGCATACTCTTCGATCATGGTCATTTAGTTCAAGTATACTAATTGATGAGAACATGTTTCGGATAGCGGCACCAATATCCAGTCCTATAATTTCTGAACAAGGAAACAAGATAGGATTGAAGGTAGCGCTTGGAATTGGTACAGGTTTGGCTGTAAGTTTATCAGGGCTGGTTTGTACTCTATTATGGAAAAGGAGTAGAGGGAGGAAAACAGAATTTGGTTTTGATCTCAACATGGATGATGAATTCCAAAAGGGATCTGGACCTAAGAGGTTTTTCTACAATGAACTAGTGAGTGCAACAAACAAATTTTCAGAGTCAGATAAGGTGGGACAAGGTGGTTTTGGTGGTGTATACAAAGGTTATTTGAAAGACTTGAACTCCTATGTTGCTATCAAGAGAATGTCAAAAGAGTCGAGACAGGGAGTACTAGAATATGTAACTGAAGTGAAAGTCATAAGTCAATTGAGACACAGAAATCTAGTACAACTTCTCGGTTGGTGCCACAGGAAGAATGATTTTCTTCTAATATACGAGTTTATGTCAAATGGAAGCTTAGATTCCCATCTATACGGTAAAAACAGCTTCTTGACGTGGACAGCGAGGTATAACATTGCATTGGGCTTGGCTTCGGCATTGCTTTACCTACAGGAAGAATGGGAGCAGTGTGTGCTTCACAGGGACATTAAATCAAGCAACATTATGTTGGATTCATGCTTTAATGCTAAGCTTGGCGATTTTGGTTTAGCTAGGCTGGTAGATCATGAGAAAGGGTCACAAACAACAATTCTAGCTGGGACAAGGGGCTATATTGCACCTGAATACTTCACATCAGGAAAAGCTAGTAAAGAATCTGATATATACAGTTTTGGTGTAGTGTTATTGGAAATAGCCACTGGAAGGAAAGCTATTGAAAGAGAAGAAATGGAGGGTCAAATAAGTATAGTTGAGTGGGTTTGGGATCTTTATGGCTTTGGAAAGTTCCTTCAAGCAGCTGACCCTAAGTTATGTGGAGCATTTGATGAGCAGCAATTCGAACATTTGGTGATTGTTGGCCTTTGGTGTGTTCATCCAGATTATTCATTCAGGCCTTCTATAAGACAAGTGATTCAGGTGCTCAAATTTGAGTCTCCTTTACCAATTCTCCCAGAAAAAATGCCTGTGCCCACCTATTTTCCCCCAACAATAAAAGCACTTTTTTCTTCAGTTTCACCCGCCCACTGGACGAAAAGTTAG 2004 0.3927 MTHLHVSFRTRTLVFCYAIGTISTLQIIHLANSLSFDYSNFKNGDINWEGDASPYKGAIQLTSNTIDQNNNYSIGRVTSFKQMHLWDMNSGKLTDFTTKFSFVVFSKSKDYGDGMSFFLADPNLPLLKNIKEGGGLGLVDGEQVLKSTQYSFVAVEFDTFNNPWDPSGVGTHVGLNFNSMRSNITKPWLTNIMKWRVYNCSIKYNSNTHNLRVSFTMYDHDDKPVKEHISHKVDLRDFLPEKVIVGFSAATGVFYEVHTLRSWSFSSSILIDENMFRIAAPISSPIISEQGNKIGLKVALGIGTGLAVSLSGLVCTLLWKRSRGRKTEFGFDLNMDDEFQKGSGPKRFFYNELVSATNKFSESDKVGQGGFGGVYKGYLKDLNSYVAIKRMSKESRQGVLEYVTEVKVISQLRHRNLVQLLGWCHRKNDFLLIYEFMSNGSLDSHLYGKNSFLTWTARYNIALGLASALLYLQEEWEQCVLHRDIKSSNIMLDSCFNAKLGDFGLARLVDHEKGSQTTILAGTRGYIAPEYFTSGKASKESDIYSFGVVLLEIATGRKAIEREEMEGQISIVEWVWDLYGFGKFLQAADPKLCGAFDEQQFEHLVIVGLWCVHPDYSFRPSIRQVIQVLKFESPLPILPEKMPVPTYFPPTIKALFSSVSPAHWTKS* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1712 667 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Tpr3g1712 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 273 IPR013320 -
Tpr3g1712 667 Pfam Protein kinase domain 361 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1712 667 SMART serkin_6 360 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1712 667 ProSiteProfiles Protein kinase domain profile. 360 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1712 667 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Tpr3g1712 667 PANTHER - 18 666 - -
Tpr3g1712 667 Pfam Legume lectin domain 33 268 IPR001220 GO:0030246
Tpr3g1712 667 CDD lectin_legume_LecRK_Arcelin_ConA 34 268 IPR001220 GO:0030246
Tpr3g1712 667 CDD STKc_IRAK 366 630 - -
Tpr3g1712 667 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 18 666 - -
Tpr3g1712 667 Gene3D - 31 278 - -
Tpr3g1712 667 SUPERFAMILY Protein kinase-like (PK-like) 344 652 IPR011009 -
Tpr3g1712 667 Gene3D Transferase(Phosphotransferase) domain 1 437 649 - -
Tpr3g1712 667 ProSitePatterns Legume lectins alpha-chain signature. 239 248 IPR000985 -
Tpr3g1712 667 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Tpr3g1712 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1712 Tpr-Chr3 15196073 15198783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1712 27 647 Receptor kinase-like Gene Family AT5G10530 47.799 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g1712 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1712 - - gmx:100780181 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1712 3 15196073 15198783 Tpr3g1712 3 15196073 15198783 ECH