Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1711 ATGGTTCATATATTCTGTTATGCAAGGGAAACAATTTTGCTTTTTCTTATAGTCCCTCTTGCACATGCTCATCCTGTGTCTTTTCATTACCCTAGGTTTAGCAATAATAGTAAAGATCAGCCAAGGCTTGAAGGCGATGCCACCATTGTAGATTCTGACTATGTTATTCGACTCACTCGGTACCCTGCTGACCCAGATAAGACTTCTGGTGTTGGCCGAGTCAGAAGTCCCGAACTTATCAAACTTTATGACAATAAAACAAATCAACTGTATGACTTTAGTACCAAGTTTTCTTTTATTATATTTTCAAATCACAGTAAGCATGGAGATGGTTTGGCATTCTTCATTGCAAGCCCAAAGCTTCCAACAACAAATCATATAGGAGGTGGAGGGGGTTTTGGTCTTATGAATGCAACGGAAGTTGCTATAAACTCTACTGAGTATTCATTTGTAGCAGTGGAGTTTGATACTCATCACAATCATTGGGACCCAACTGTCTACCATGTGGGAGTGAATATTAATTCTGTGGTGTCCGATAAACATATTGAATGGTCCGTGGATGTTTCAGAAAGGAAATTTTATCATTGTAGCATAGAATATAGTTCCAGAAACAAAAATCTGGATGTTTCTTTCACCGGAAAGAGATTGAATGAAGGGCAAGAGGAGCAGAGATTTTCACACACAATTGATCTAAGAGAGCATTTAACAGAGCATGTTATTGTTGGCATATCAGCTTCAACAGGATCTGCAGATGAGGAACATTTGCTGCGGTCGTGGTCTTTTAGTACTCGGCATGAAGATACTCCTAAGAAGAAACGGAACGTAATCATAACTAGATTATGTGAAGTATTAGGAAGTGGCGTCCTAATGATATCTTTGAGTTGCATAATAATATTCTTCATTGCATTGTGGAAAAAGAATAAAGCAAAAGAAGAACCTGCTACGTCAGAAACCATCTCTGATCAGAACATGGATGAAGAATTCCAATTGGGTGCTGGGCCTAAGAAGTTTAGTTATTCGGAATTATTGGATGCAACAAACAACTTTGAAGAGACACTGAAGCTTGGTCAAGGTGGTTTTGGTAGTGTTTACAAGGGTTATTTTAAAGACACAAACTCAGTCGCAGCCATAAAGAGGAGGATATCACCAATTGCTCGGCAGGGTAAAAAGCAATACTCAGCAGAAGTGAAGATCATTAGCCAATTGAGACATAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAATGAACTTATCCTAATATACGAATACATGCCTAATGGCAGCTTAGATTTTCATCTTTTTCGTGAAGGTAGCATCTTGTCATGGCACTTGAGGTACAATATAGTTCTTGGGTTGGCTTCAGCATTGCTTTATTTGCAGGAAGAATGGGAAAAATGTGTGATTCACAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAATACTAAGCTTGGTGATTTTGGGCTAGCTAGGCTGATGGATCATGAGAAAGGGTCAGAAACTACAGTTGTAGCTGGAACCAGAGGTTACCTAGCTCCAGAATACATGGACTCAGGCAAGGCTAGAAAGGAATCTGACATATTCAGTTTCGGGGTTGTTTTGTTGGAGATAGCCTGTGGAAAAAAGGCCATACACTACCAAGAATTGGAGGGTGAAGTATCATTAGTTGAGTGGGTTTGGGAGCTATATGGATTGAAAAATATCATTGCAGCAGCAGATCGTAAGCTATATGGGCAATTTGATGTGAAGGAATTGGAATGTTTGCTAGTAGTTGGACTTTGGTGTGCTAATCCAGATAGCACATCAAGACCATCTATAAAGACAGTGATTAAGGCGCTAAACTTTGAAGCTCCATTACCAATTCTTCCACAAAACATGCTATCTCTAGCATCTCGGTCTGCCGCAACAAATGAGCAATTATTATCAGTTCCTTCTTTCATTAGGTTCACAGGTTAG 1974 0.3946 MVHIFCYARETILLFLIVPLAHAHPVSFHYPRFSNNSKDQPRLEGDATIVDSDYVIRLTRYPADPDKTSGVGRVRSPELIKLYDNKTNQLYDFSTKFSFIIFSNHSKHGDGLAFFIASPKLPTTNHIGGGGGFGLMNATEVAINSTEYSFVAVEFDTHHNHWDPTVYHVGVNINSVVSDKHIEWSVDVSERKFYHCSIEYSSRNKNLDVSFTGKRLNEGQEEQRFSHTIDLREHLTEHVIVGISASTGSADEEHLLRSWSFSTRHEDTPKKKRNVIITRLCEVLGSGVLMISLSCIIIFFIALWKKNKAKEEPATSETISDQNMDEEFQLGAGPKKFSYSELLDATNNFEETLKLGQGGFGSVYKGYFKDTNSVAAIKRRISPIARQGKKQYSAEVKIISQLRHRNLVKLNGWCHKKNELILIYEYMPNGSLDFHLFREGSILSWHLRYNIVLGLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARLMDHEKGSETTVVAGTRGYLAPEYMDSGKARKESDIFSFGVVLLEIACGKKAIHYQELEGEVSLVEWVWELYGLKNIIAAADRKLYGQFDVKELECLLVVGLWCANPDSTSRPSIKTVIKALNFEAPLPILPQNMLSLASRSAATNEQLLSVPSFIRFTG* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1711 657 SUPERFAMILY Protein kinase-like (PK-like) 334 627 IPR011009 -
Tpr3g1711 657 SMART serkin_6 349 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1711 657 CDD lectin_legume_LecRK_Arcelin_ConA 26 265 IPR001220 GO:0030246
Tpr3g1711 657 Gene3D Phosphorylase Kinase; domain 1 334 426 - -
Tpr3g1711 657 Pfam Protein kinase domain 350 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1711 657 ProSiteProfiles Protein kinase domain profile. 349 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1711 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 268 IPR013320 -
Tpr3g1711 657 Gene3D Transferase(Phosphotransferase) domain 1 427 636 - -
Tpr3g1711 657 Gene3D - 24 279 - -
Tpr3g1711 657 CDD STKc_IRAK 355 620 - -
Tpr3g1711 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Tpr3g1711 657 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Tpr3g1711 657 Pfam Legume lectin domain 26 272 IPR001220 GO:0030246
Tpr3g1711 657 PANTHER - 11 656 - -
Tpr3g1711 657 ProSitePatterns Legume lectins beta-chain signature. 151 157 IPR019825 -
Tpr3g1711 657 PANTHER LECTIN RECEPTOR KINASE 11 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1711 Tpr-Chr3 15193207 15196002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1711 11 632 Receptor kinase-like Gene Family AT5G10530 44.288 5.36e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g1711 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1711 - - cam:101492002 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1711 3 15193207 15196002 Tpr3g1711 3 15193207 15196002 ECH