Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1704 ATGATTCTATGTCCACACAACATCAAATTTGCAACCATGGCAGCATCTTGCAACTTTCAGAAAATCCATCTTCTTGCTTTCTTTCATTTAACATTATCCCTCTTGCTTCTTGTAACATCTCATGGAGCTCCATTATCATTCAACTATGATCAACTTGGTAGTGACAAAACAAAAGCCTTAAATTTTTCAGGTACTGATGTCTATCAAGACAACCAAGTCCTCCAACTCACAAGATACGAGAAAGACAGTCTAGGTAGAGTCACATATTCAAAACTGTTTCATCTTTGGGACATAAACACAAATCAAGTCACAGATTTCACTACTCGTTTCTCATTTACTATTAACACCCCTAACAAAACCAATCATGGAGATGGCATCACATTCTATTTGGCACATCCAAATTTTCCACTACCTGTTCCAAGAGATGGAAGTGGTATTGGTCTTGTAAGCCCTGTTAAATTGAATAATCCAAATTTCAGAAAAGAATATCCATTTGTAGCTGTGGAGTTTGATACTTTTGTTAATGATTTTGATCCTAAATATGATCATGTTGGGATTGATGTTAATTCTATAAGCACTTCTTACACTACACAATGGTTCACTAGCATGGATGAAAGAGGATATGATGCTGAAGTGAGTTATAATTCTAGTTCAAACAACTTATCTGTCACCTTCACAGGTTATTCAGATAACAAAATGATTCAACAGAATTTGTGGAGTGTTGTCGATTTGAGAGAAGTTCTACCTGATTGGGTTGAATTTGGATTCACTTCAGCAACAGGGTTGTTATGGGGGGAGTATCATACTCTTAACTCATGGTCCTTCAACTCAAATTTAGATTTTGAAGCAGAAAAAGATGGAACAAAAATAGGACTAGTTATAGGACTAAGTGTTGGTGGTGCTGTTGTTTTGATTTGTGTTATTGGGTTGGTTTGTTTTGTGAAATGGAAACTGAGGAATAAATATACGAACGATGTTTTGCATTCTGATCTTGCAATGGATAATGATTTTGAAAGAAGCTCTCTACCTAAGAAGTTTACCTTTGAAGAGCTTGCTAGAGCAACTAACAACTTTGCAAAAGAACACAAAATCGGAGAAGGAGGTTTCGGAGGAGTCTACAAGGGATTTATAAAAGACTTGAAAACTCATGTTGCTATAAAGAAGGTTTCTAAGGAATCAAATCAAGGAGTTAAGGAGTATGCATCTGAAGTTAAAGTGATTAGTCAATTAAGGCATAAGAATTTAGTTCAACTTTTCGGATGGTGTCACAGACAAAACGATCTGCTTTTAGTTTATGAGTTTGTGCAAAATGGAAGCTTAGATTCTTACCTTTTCAAAGGAAAAGGTTTACTAACATGGACAGTGAGATATAATATAGCTAGAGGCTTAGCCTCAGCATTATTATACCTTCATGAAGAGTGCGAACAATGCGTCCTTCATAGAGACATAAAACCAAGCAATATTATGTTGGATACTAATTTCAATACAAAGCTTGGTGATTTTGGTTTGGCTAGATTAATGAACCACGAGATCGAATCAAAAACAACTGTTTTAGCAGGTACATATGGTTATTTATCACCTGAAGCTGCTACTAGAGGTAAAGCTAGTAGAGAAGCTGATGTATATAGTTTTGGAGTTGTTGCATTGGAAATAGCTTGTGGTAGAAAAGCAATTGAACCGAGTCTCGTTGAAGATAATATTTACTTGGTAGATTGGGTTTTGGAACTTTATGGTAAAGGTGAGCTTCTTAAAGGAAGTGATTCAAGATTATATGGAGAATTCAATGAGAAGGAAATTGAGAGGTTAATGATAGTTGGACTTTGGTGTACTCATATTGATCATGTTCAAAGACCTATGATTAGGCAAGTTGTTCAAGTGCTTAATTTTGATGTTCCATTGCCTAATCTTCCATTACAGATGAATGCTTCTACCTATAATACATCATTCTATTCTGTGTCTTCTAAATCTAAGAGTCCTTCTGATTTTGCAACTAAGACTTCAACTTCAAGCAATAGTACCGTCACAGGGTCCTCCTCGCAATCAAGTACTGCCTTTGAAGTCATTTCTCCATCAGCTGCACTTCTAAATACATTCTAG 2097 0.3577 MILCPHNIKFATMAASCNFQKIHLLAFFHLTLSLLLLVTSHGAPLSFNYDQLGSDKTKALNFSGTDVYQDNQVLQLTRYEKDSLGRVTYSKLFHLWDINTNQVTDFTTRFSFTINTPNKTNHGDGITFYLAHPNFPLPVPRDGSGIGLVSPVKLNNPNFRKEYPFVAVEFDTFVNDFDPKYDHVGIDVNSISTSYTTQWFTSMDERGYDAEVSYNSSSNNLSVTFTGYSDNKMIQQNLWSVVDLREVLPDWVEFGFTSATGLLWGEYHTLNSWSFNSNLDFEAEKDGTKIGLVIGLSVGGAVVLICVIGLVCFVKWKLRNKYTNDVLHSDLAMDNDFERSSLPKKFTFEELARATNNFAKEHKIGEGGFGGVYKGFIKDLKTHVAIKKVSKESNQGVKEYASEVKVISQLRHKNLVQLFGWCHRQNDLLLVYEFVQNGSLDSYLFKGKGLLTWTVRYNIARGLASALLYLHEECEQCVLHRDIKPSNIMLDTNFNTKLGDFGLARLMNHEIESKTTVLAGTYGYLSPEAATRGKASREADVYSFGVVALEIACGRKAIEPSLVEDNIYLVDWVLELYGKGELLKGSDSRLYGEFNEKEIERLMIVGLWCTHIDHVQRPMIRQVVQVLNFDVPLPNLPLQMNASTYNTSFYSVSSKSKSPSDFATKTSTSSNSTVTGSSSQSSTAFEVISPSAALLNTF* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1704 698 PANTHER - 28 695 - -
Tpr3g1704 698 CDD lectin_legume_LecRK_Arcelin_ConA 45 279 IPR001220 GO:0030246
Tpr3g1704 698 SMART serkin_6 358 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1704 698 Pfam Legume lectin domain 45 286 IPR001220 GO:0030246
Tpr3g1704 698 CDD STKc_IRAK 364 628 - -
Tpr3g1704 698 PANTHER LECTIN RECEPTOR KINASE 28 695 - -
Tpr3g1704 698 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
Tpr3g1704 698 Gene3D Transferase(Phosphotransferase) domain 1 435 649 - -
Tpr3g1704 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Tpr3g1704 698 Pfam Protein kinase domain 359 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1704 698 ProSitePatterns Legume lectins beta-chain signature. 166 172 IPR019825 -
Tpr3g1704 698 ProSiteProfiles Protein kinase domain profile. 358 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1704 698 ProSitePatterns Legume lectins alpha-chain signature. 248 257 IPR000985 -
Tpr3g1704 698 ProSitePatterns Protein kinases ATP-binding region signature. 364 388 IPR017441 GO:0005524
Tpr3g1704 698 SUPERFAMILY Protein kinase-like (PK-like) 342 654 IPR011009 -
Tpr3g1704 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 279 IPR013320 -
Tpr3g1704 698 Gene3D - 43 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1704 Tpr-Chr3 15162867 15167116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1704 35 646 Receptor kinase-like Gene Family AT5G10530 44.904 9.95e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g1704 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1704 - - cam:101491058 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1704 3 15162867 15167116 Tpr3g1704 3 15162867 15167116 ECH