Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1703 ATGGTTCCTATATTTTATTATGCAAGAGGAAAAATTTTGCTTTTCCTCGTCGTCCTTCTTGCACATGCTCACCTTGTGTCTTTTGATTACCCTATGTTTATTCACAATCGTGAAGAGCCACTAGAATTTGATGGAGATGCCACTGTTGAAGATTTTGACTACGCTATTCAACTCACTGGGTACTACCCTGGTGACCCAGATAAGGCTTCTGATGTTGGTCGAGTCACAAATCCCAAACTTATCAAACTTTATGACAGAAGCATAAATCAAGTTTATGACTTTACTACAAAGTTTTCATATTACAGTATTTATGGAGATTTTGCGTTCCTCCCTGCAAGCTCAGATTTCCTAAAAGAAAATCATATAGAAGATGGATTGGCGTTTGTTCTTGTGCCTGGAAATGAAGTTGCTTTAATGAACACAACTTGCTGCCTTGCAATATCAGATTTCCTAAAAGGAAATCATTTAGAAGATGGATTAGAGGTTATTCTTGTGCCTGCAAGCGAAGTTGCTTTAAACTCAACTGAGTATTCATCTGAGTCTGTGGAGTTCTACACGTTTAAAAATGGTAATCTAAGTGTTTCTAAATACAGTTCAAAAAATAATATTCTAAATGTTTCTGCCACTGGATATAGATTGACTGAAGGGAAAGAGCCACAGAACTCTTCACACACCATTGATCTAAGAGAGCATTTACCAGAGTATGTTGGCATATCAGCTTCAACAGGAAAAGTAGATAAGAAACATACGTTGCGGTTTTGGTCTTTTAGTACAAGCCAAGCAAATTATGAAGTTGATCATGAGAAGAAATTGTGGGAGGGATTGGCAGTTGGTTTTGTATGTTTGTCTTTGTGTTTATTAGCAATATTAATAATTTTATTGTGGAAGAAGAATAAAGGAAAAGAAGAAGAACCTAATTCAGAAACCGTTTCCGATCAGAATATGGATGAAGAATTCCAAATGAGTGCTGGACCTAAAAAGATTAGTTATCAGGAATTATTGGATGCAACAAACAACTTTGAAGAGACACTGAAGCTCGGTGAGGGTGGTTTCGGTGGTGTTTATAAAGGTTATTTTAAAGACACAAACTCAGTTGCAGCAATTAAGAGGAGGAAATCAGCAGATTCAGGGCAGGGTATAAAGCAATACTCAGCAGAAGTGAAGATCATTAGCCAATTGAGACACAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAATGAACTGATCCTAATATACGAATACATGCCAAATGGCAGCTTAGATTTTCATCTTTTTCGTGGAGGAAGAAGCATCTTGTCATGGCACTTGAGGTACAATATAGCCCTTGGGTTAGCCTCAGCATTGTTTTATTTGCAGGAGGAATTGGAAAAATGCGTGATTCATAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAATACTAAGCTTGGGGATTTTGGTCTAGCTAGGCTGATGGATCATGAGAAAGAGTCAGAAACCACAATTGTAGCCGGAACCAGGGGTTACCTAGCTCCGGAATACATGGACACAGGAAAGGCTAGAAAGGAATCTGACATATTCAGTTTCGGGGTTGTTTTGTTGGAGATAGCCTGTGGGAAAAAAGCCATACACCACCAAGAATTGAAGGGTGAAGTATCATTAGTTGAGTGGGTTTGGGAGCTATATGGATTGAAAAATGTCATTGCAGCAGCAGATCCAAAGCTATATGGGCAATTTGATGTGAAGGAATTGGAATGTTTGCTAGTAGTTGGACTTTGGTGTGCTAATCCAAATAACACATCAAGACCATCTATAAAGAAAGTGATTAAGGTGCTCAACTTTGAATCCCCATTACCAATTCTTCCACAAAACATGCCATTTCTAGGTCCACTGTCTTCTCCCATAAATAATGGGCAATTTTTTTCAGTTCCCTCTTTCTTTACGGCAAAAGGTTAA 1953 0.3825 MVPIFYYARGKILLFLVVLLAHAHLVSFDYPMFIHNREEPLEFDGDATVEDFDYAIQLTGYYPGDPDKASDVGRVTNPKLIKLYDRSINQVYDFTTKFSYYSIYGDFAFLPASSDFLKENHIEDGLAFVLVPGNEVALMNTTCCLAISDFLKGNHLEDGLEVILVPASEVALNSTEYSSESVEFYTFKNGNLSVSKYSSKNNILNVSATGYRLTEGKEPQNSSHTIDLREHLPEYVGISASTGKVDKKHTLRFWSFSTSQANYEVDHEKKLWEGLAVGFVCLSLCLLAILIILLWKKNKGKEEEPNSETVSDQNMDEEFQMSAGPKKISYQELLDATNNFEETLKLGEGGFGGVYKGYFKDTNSVAAIKRRKSADSGQGIKQYSAEVKIISQLRHRNLVKLNGWCHKKNELILIYEYMPNGSLDFHLFRGGRSILSWHLRYNIALGLASALFYLQEELEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARLMDHEKESETTIVAGTRGYLAPEYMDTGKARKESDIFSFGVVLLEIACGKKAIHHQELKGEVSLVEWVWELYGLKNVIAAADPKLYGQFDVKELECLLVVGLWCANPNNTSRPSIKKVIKVLNFESPLPILPQNMPFLGPLSSPINNGQFFSVPSFFTAKG* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1703 650 Gene3D Phosphorylase Kinase; domain 1 325 417 - -
Tpr3g1703 650 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Tpr3g1703 650 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Tpr3g1703 650 SMART serkin_6 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1703 650 CDD STKc_IRAK 346 612 - -
Tpr3g1703 650 Pfam Legume lectin domain 26 268 IPR001220 GO:0030246
Tpr3g1703 650 PANTHER LECTIN RECEPTOR KINASE 14 648 - -
Tpr3g1703 650 Gene3D - 25 260 - -
Tpr3g1703 650 PANTHER - 14 648 - -
Tpr3g1703 650 ProSiteProfiles Protein kinase domain profile. 340 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1703 650 Pfam Protein kinase domain 341 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1703 650 SUPERFAMILY Protein kinase-like (PK-like) 317 613 IPR011009 -
Tpr3g1703 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 267 IPR013320 -
Tpr3g1703 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1703 Tpr-Chr3 15152291 15154243 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1703 12 625 Receptor kinase-like Gene Family AT5G10530 41.223 1.99e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g1703 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1703 - - cam:101492002 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1703 3 15152291 15154243 Tpr3g1703 3 15152291 15154243 ECH