Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1700 ATGTTAATATATTTTTTGTGGAAGAAGAATAAAGGAAAAGAAGAAGAACCTAATTCAGAAACCGTTTCTGATCAGAATATGGATGAAGAATTCCAAATGGGTGCTGGACCTAAGAAAATTTGTTATCAGGAATTATTGAATGCAACAAACAACTTTGAAGAGAAACTGAAGCTTGGCCAAGGTGGTTTTGGTGGTGTTTACAAGGGTTATTTTAAAGACACAAACTCAGTTGCAGCTATAAAGAGGATATCAGCAAATTCACGGCAGGGTATTAAGCAATACTCAGCAGAAGTGAAGATCATTAGCCAATTGAGACATAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAATGAATTTATCCTAATATACGAATACATGCCAAATGGCAGCTTAGATTTTCATCTTTTTCTTGGAGGAAGCATCTTGTCATGGCACTTGAGGTACAATATAGCTCTTGGGTTAGCCTCAGCATTGTTTTATTTGCAGGAGGAATTGGAAAAATGCGTGATTCATAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAATACTAAGCTTGGGGATTTTGGTCTAGCTAGGCTGATGGATCATGAGAAAGAGTCAGAAACCACAATTGTAGCCGGAACCAGGGGTTACCTAGCTCCGGAATACATGGACACAGGAAAGGCTAGAAAGGAATCTGACATATTCAGTTTCGGGGTTGTTTTGTTGGAGATAGCCTGTGGGAAAAAAGCCATACACCACCAAGAATTAAAGGGTGAAGTATCTTTAGTTGAGTGGGTTTGGGAGCTATATGGATTGAAAAATGTCATTGCAGCAGCAGATCCAAAGCTATATGGGCAATTTAATGCGAAGGAAATGGAATGTTTGCTAGTAGTTGGACTTTGGTGTGCTAATCCAAATAACACATCAAGACCATCTATAAACAAAGTGATTAAGGTGCTCAACTTTGAATCCCCATTACCAATTCTTCCACAAAACATGCCATTTCTAGGTCCACTGTCTTCTCCCATAAATAATGGGCAATTTTTTTCAGTTCCCTCTTTCTTTACGGCAAAAGGTTAA 1083 0.385 MLIYFLWKKNKGKEEEPNSETVSDQNMDEEFQMGAGPKKICYQELLNATNNFEEKLKLGQGGFGGVYKGYFKDTNSVAAIKRISANSRQGIKQYSAEVKIISQLRHRNLVKLNGWCHKKNEFILIYEYMPNGSLDFHLFLGGSILSWHLRYNIALGLASALFYLQEELEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARLMDHEKESETTIVAGTRGYLAPEYMDTGKARKESDIFSFGVVLLEIACGKKAIHHQELKGEVSLVEWVWELYGLKNVIAAADPKLYGQFNAKEMECLLVVGLWCANPNNTSRPSINKVIKVLNFESPLPILPQNMPFLGPLSSPINNGQFFSVPSFFTAKG* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1700 360 Gene3D Transferase(Phosphotransferase) domain 1 129 335 - -
Tpr3g1700 360 PANTHER LECTIN RECEPTOR KINASE 2 358 - -
Tpr3g1700 360 SMART serkin_6 52 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1700 360 SUPERFAMILY Protein kinase-like (PK-like) 37 340 IPR011009 -
Tpr3g1700 360 ProSiteProfiles Protein kinase domain profile. 52 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1700 360 CDD STKc_IRAK 58 322 - -
Tpr3g1700 360 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Tpr3g1700 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Tpr3g1700 360 Gene3D Phosphorylase Kinase; domain 1 37 128 - -
Tpr3g1700 360 PANTHER - 2 358 - -
Tpr3g1700 360 Pfam Protein kinase domain 52 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1700 Tpr-Chr3 15137975 15139057 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1700 2 335 Receptor kinase-like Gene Family AT5G10530 56.083 4.36e-134 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g1700 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1700 - - cam:101492002 593.578