Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1694 ATGGCTTCTTTGTGGTTTCTCAACTTCCTTTTCAAATGCTTTCATCACTTCGCATGGCTTGTTGTTGCTCTGTTGTATCCTATGTGTGCTTCCATAAAAGCAATTGAGACTGATTCCTATGAAGAAACTAAGCATTTGATCTCATATTGGATACTTCTTTCATTAATTTACCTCTTTGATTATGCTTTAATGAGCCTTATTCCATGGTTTCACCTTTGGCCGTACATTAAGCTAATGATCGTCTTCTGGCTCATCAGACCTGACTTTCGACGAGCTTCTTATGTTTATAATAACCTTATGCGCATCATGAAACCACAAATAGTCACATGCTGGAGGAAGTGTTTTGTAGAGAAAGATAACTTTTTAATGAATGCAGAGAGATATATGAAAGAGAACGGAACTGAGGCCTTAGAGAAACTCATTGCTAGTAAGAACACAATGTGTAGGCCTGATGCAGACGTGTCGAATGAAATCAAAGCTGTTGAGATGCTAAAGACAAATGGGGAAAGATTCCAAACAGAACACAAAGACATCAAAGATTTGGAGGCTATTGTGAAAAGAGAAATTCCTGCAACCAAGCAAATGACCTATGCTAATATTGAGGCAAGTCGAAAGGTATCATCAGCCATAGTAGAAACCAAAGGAATAATGGGAAGAGACCCAGCTGGTGGAGAGATTCCTCGGAGTTCTACACAGAAAGATGTGCAGAAAGAGTGGACTTGTGCTTTGTGTTTGGTAAAAACATCGAGCGAGATAACCTTGAATTCCCACCTCAATGGGAGGAGACACAGGGAAGCTTGTGAAGCAGCATCCGCAACTTTGAAAGCAAAGAAGCAACCTGCTTCGCAAAAGAACGTCCTGCCAGAACCTTTTAGGATGATTAATTCCAAATTAATATGTAGAGTTTGTAATGTTATGCTTCCAAGTGAGGAGTGCATGGCCTCTCACATAAAAGGGGTGAAGCACTTGTCTAATATGAAAAGTTGA 987 0.3992 MASLWFLNFLFKCFHHFAWLVVALLYPMCASIKAIETDSYEETKHLISYWILLSLIYLFDYALMSLIPWFHLWPYIKLMIVFWLIRPDFRRASYVYNNLMRIMKPQIVTCWRKCFVEKDNFLMNAERYMKENGTEALEKLIASKNTMCRPDADVSNEIKAVEMLKTNGERFQTEHKDIKDLEAIVKREIPATKQMTYANIEASRKVSSAIVETKGIMGRDPAGGEIPRSSTQKDVQKEWTCALCLVKTSSEITLNSHLNGRRHREACEAASATLKAKKQPASQKNVLPEPFRMINSKLICRVCNVMLPSEECMASHIKGVKHLSNMKS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1694 328 Pfam TB2/DP1, HVA22 family 27 101 IPR004345 -
Tpr3g1694 328 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 1 284 - -
Tpr3g1694 328 SMART c2h2final6 298 322 IPR013087 -
Tpr3g1694 328 SMART c2h2final6 239 263 IPR013087 -
Tpr3g1694 328 Gene3D Classic Zinc Finger 274 328 - -
Tpr3g1694 328 Gene3D Classic Zinc Finger 225 269 - -
Tpr3g1694 328 SMART ZnF_U1_5 236 270 IPR003604 GO:0003676|GO:0008270
Tpr3g1694 328 SMART ZnF_U1_5 295 328 IPR003604 GO:0003676|GO:0008270
Tpr3g1694 328 PANTHER HVA22-LIKE PROTEINS 1 284 IPR004345 -
Tpr3g1694 328 SUPERFAMILY beta-beta-alpha zinc fingers 223 270 IPR036236 -
Tpr3g1694 328 Pfam Zinc-finger of C2H2 type 299 322 - -
Tpr3g1694 328 Pfam Zinc-finger of C2H2 type 239 263 - -
Tpr3g1694 328 SUPERFAMILY beta-beta-alpha zinc fingers 286 327 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1694 Tpr-Chr3 15092960 15094978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1694 239 327 C2H2 Transcription Factor Family AT2G19380 30.693 9.07e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1694 - - mtr:MTR_4g093510 383.645