Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1691 ATGGCTTTTTCATTGTTTCTCAATCTCACTTTCAAATGCCTTCATCATTTCGCATGGCCTTTTCTTGCTCTGCTGTATCCTATGTGTGCTTCCGTACAAGCAATTGAGACTGATTCCTATGAAGAAACTAAGCATTTGATCTCATATTGGATACTTCTTTCATTAATTTACCTCTTTGAATATGCTTTAATCAGCCTTATTCCATGGTTTCAGCCCTGGCTGTACATTAAGCTAATGATCGTTTTCTGGCTCACTATACCGGACTTTGGACGAGCTTCTTATGTTTATAATAACCTTATTCGCTCCATGAAACCCAAAATAGACACATGGAGGAAGTGTTTTGTTGAGGAAGAAAACTTTTTAATGCATGTAGAGAAATATATGAAAGAGAATGGATCTGAAGCCTTAGAGAAACTCATTGCTAGCAAGAACACAATGCATAGGCCTGATGCAGAGGTGACAAATGAAATCATAGATAATGATAATAAAGAAATGCTAAAGACGAATGGAGAAAGGCTCCAATCAGAGAACAAAGACATCAAAGATTTGGTGGCTATTGAGAAAAAAGAAATTCCTGCAACCAAACAAAGAACCTATGCTGATATAGTAGCGAGTCAAACGACATCATCAACCATAGTAGAAACCAAAGAAATAGCTGGGAGAGACACAGCTGGTGGAGAGCATCCTCAGAGTTCTTCTACACTGAAGGAAGTGCAGAGAGAGTGGACCTGTGCTTTATGTTTGGTAACATCTTCGAGCGAGAAAGACTTGAATTCCCACCTTAATGGGAGGAGACACAGGAAGGCTTGTGAAGCCGCGGGTTTGAAAGTAGCAAAGAAACTACCTGCTACGCAGAAGAACGTCCTGCCAGAACCTTTTAGGATGATTAATTCCAAATTAATATGTAAAGTTTGTAATGTTATGCTTCCAAGTGAGGAGTACATGGCCTCTCACATAAAAGGGTGGAAGCACTTGTCTAATATGAAAAGTTGA 993 0.3927 MAFSLFLNLTFKCLHHFAWPFLALLYPMCASVQAIETDSYEETKHLISYWILLSLIYLFEYALISLIPWFQPWLYIKLMIVFWLTIPDFGRASYVYNNLIRSMKPKIDTWRKCFVEEENFLMHVEKYMKENGSEALEKLIASKNTMHRPDAEVTNEIIDNDNKEMLKTNGERLQSENKDIKDLVAIEKKEIPATKQRTYADIVASQTTSSTIVETKEIAGRDTAGGEHPQSSSTLKEVQREWTCALCLVTSSSEKDLNSHLNGRRHRKACEAAGLKVAKKLPATQKNVLPEPFRMINSKLICKVCNVMLPSEEYMASHIKGWKHLSNMKS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1691 330 Gene3D Classic Zinc Finger 226 272 - -
Tpr3g1691 330 Gene3D Classic Zinc Finger 278 330 - -
Tpr3g1691 330 Pfam Zinc-finger of C2H2 type 242 266 - -
Tpr3g1691 330 Pfam Zinc-finger of C2H2 type 301 324 - -
Tpr3g1691 330 PANTHER HVA22-LIKE PROTEINS 1 273 IPR004345 -
Tpr3g1691 330 SUPERFAMILY beta-beta-alpha zinc fingers 289 329 IPR036236 -
Tpr3g1691 330 SMART ZnF_U1_5 239 273 IPR003604 GO:0003676|GO:0008270
Tpr3g1691 330 SMART ZnF_U1_5 297 330 IPR003604 GO:0003676|GO:0008270
Tpr3g1691 330 SMART c2h2final6 300 324 IPR013087 -
Tpr3g1691 330 SMART c2h2final6 242 266 IPR013087 -
Tpr3g1691 330 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
Tpr3g1691 330 SUPERFAMILY beta-beta-alpha zinc fingers 226 272 IPR036236 -
Tpr3g1691 330 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1691 Tpr-Chr3 15069988 15073061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1691 242 329 C2H2 Transcription Factor Family AT2G19380 28.000 2.27e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1691 - - mtr:MTR_4g093270 400.208