Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1683 ATGGCTTTTTCATTGTTTCTCAATCTCACTTTCAAATGCCTTCATCATTTCGCATGGCCTTTTCTTGCTCTGCTGTATCCTATGTGTGCTTCCGTACAAGCAATCGAGACTGATTCCGATGAACAAACTAAGCATTTGATCTCATATTGGATACTTCTTTCATTAATTTACCTCTTTGAATATGCTTTAATCAGCCTTATTCCATGGTTTCAGCCCTGGCTGTACATTAAGCTAATGATCGTTTTCTGGCTCACTATACCGGACTTTGGACGAGCTTCTTATGTTTATAATAACCTTATTCGCTCCATGAAACCCAAAATAGACACATGGAGGAAGTGTTTTGTTGAGGAAGATAACTTTTTAATGCATGTAGAGAAATATATGAAAGAGAATGGATCTGAAGCCTTAGAGAAACTCATTGCTAGCAAGAACACAATGTGTTGGAATAATGCAGAAACGACAAATGAAATCATCGCTACCGATAATAAAGAAGTACTAAAGACAAATGGAATAAAACTCCAACCAGAACACAAAGACATCAAAGATTTGGAGGCTATTGAGGAAAAAGAAGTTCATGTTACAAAGCAAGATATTCCTTTTATGCCTAAAATTGTGACAAGTCAAAATGCATCATCAGTCACTAAAGGAACAGCAGACAGTGACACAGCTGGTGGCAAGCTTCCTCTTAGTACTACGCACAAGGAAGTACAGAAAGAGTGGACTTGTGCTTTGTGTTTGATAACAGCTACAAGTGAGAAAGACTTAAATTCCCACCTTAATGGGAGGAAACACAGAGATAGTTGTGAGGCAGCTTTGAGAGCAAAGAAGCAAGCTGCTCTGCAGAAGCTGAAAAATTATCAGTCCAAAGAGGATGTAAAACAGAAGAGTTTTAGCAATAAGTTAGATTCGAGTGTCAAGAATGGAGATGGACTTGTTAACAAAGGGTCGAAGGGAACAGTAGCGATGCATCATAAGGTGCTAAAGAATCTGTCTGAGCCTGTTAGGATACATAATTCCAAATTAATGTGCTTAGTTTGTAATTCTGTCCTTCATTGCGAGGCCAATGTGGCCTCTCACCTAAATGGGAAGAAGCATTTGGCTAAAATGCAAAGCAATGTTGATAGTTTAAATAACCTTAGAGACACTGGCGTTGCTCGAAATTAA 1164 0.384 MAFSLFLNLTFKCLHHFAWPFLALLYPMCASVQAIETDSDEQTKHLISYWILLSLIYLFEYALISLIPWFQPWLYIKLMIVFWLTIPDFGRASYVYNNLIRSMKPKIDTWRKCFVEEDNFLMHVEKYMKENGSEALEKLIASKNTMCWNNAETTNEIIATDNKEVLKTNGIKLQPEHKDIKDLEAIEEKEVHVTKQDIPFMPKIVTSQNASSVTKGTADSDTAGGKLPLSTTHKEVQKEWTCALCLITATSEKDLNSHLNGRKHRDSCEAALRAKKQAALQKLKNYQSKEDVKQKSFSNKLDSSVKNGDGLVNKGSKGTVAMHHKVLKNLSEPVRIHNSKLMCLVCNSVLHCEANVASHLNGKKHLAKMQSNVDSLNNLRDTGVARN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1683 387 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 1 295 - -
Tpr3g1683 387 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
Tpr3g1683 387 SUPERFAMILY beta-beta-alpha zinc fingers 232 271 IPR036236 -
Tpr3g1683 387 Pfam Zinc-finger of C2H2 type 240 264 - -
Tpr3g1683 387 Pfam Zinc-finger of C2H2 type 343 365 - -
Tpr3g1683 387 PANTHER HVA22-LIKE PROTEINS 1 295 IPR004345 -
Tpr3g1683 387 Coils Coil 269 289 - -
Tpr3g1683 387 SMART ZnF_U1_5 237 271 IPR003604 GO:0003676|GO:0008270
Tpr3g1683 387 SMART ZnF_U1_5 338 372 IPR003604 GO:0003676|GO:0008270
Tpr3g1683 387 Gene3D Classic Zinc Finger 327 373 - -
Tpr3g1683 387 SUPERFAMILY beta-beta-alpha zinc fingers 321 370 IPR036236 -
Tpr3g1683 387 Gene3D Classic Zinc Finger 225 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1683 Tpr-Chr3 14986519 14989538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1683 240 365 C2H2 Transcription Factor Family AT2G19380 30.159 6.19e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1683 - - gmx:100812073 395.201