Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1646 ATGGTTCATTTGACCACATTTGGAGAGTTACTTAAGTCAAAAGAAATGAGTGGAAATGATGTTGAGGGAGGGAATGAGGAGGGAAATATAACAGTGACATGGGAGAAATTAAGGGTCACTGTTCCAAATGGAAACAAAAAAAGGAAAGCAATTCTGCAGGATCTTAATGGTTATGCTCAACCTGGAAGACTTTTGGCTGTTATGGGTCCTTCTGGCTCTGGAAAATCCACACTTCTTGATGCTTTAGCAGGAAGATTAAGCTCAAACCTAAAGCACACAGGAAATATTCTAATCAATGGTCACAAACAAGCACTGGCTTATGGAATATCAGGGTATGTAACACAAGACGACGCTATGCTGTCAACATTAACGGCCGGAGAAACTTTATACTACTCGGCTCAACTTCAATTTCCAGATTCCATGTCCATAACAGAGAAGAGAGAACAAGCAGATATTATACTCAGAGAAATGGGTCTAATAGATGCCGTTAACACAAGGGTTGGAGGATGGAGTTCTAAAGGCCTAAGTGGTGGACAAAAGAGGAGACTTAGCATTTGCATCGAGATTCTAACTCGCCCGAGACTTCTCTTCCTTGATGAACCAACGAGCGGACTTGACAGTGCAGCTTCTTATTATGTTATGAGCAGGATTGCACGTTTGAATTTAAGCGACGGCATTCGAAGGACTATTGTTGTATCCATCCATCAACCTAGCAGTGAAGTTTTTGAACTTTTTCATGACCTTTGTCTTCTGTCTTCAGGTGAAACTGTATATTTTGGTCCAGCCTATGATGCAAACCAGTTTTTTACTGCAAATGGTTTTCCTTGTCCAACACTCCATAATCCTTCAGATCACTACTTAAGGGTCATAAACAAAGATTTTGAAATGGATGTTGAAGAAGGCTTTGGTAAGGGAGTAACAACAGAAGAAGCAATTGATATCCTTGTAAAGACTTATAAATTGTCTCGAATTAGATCCAAAGTTAAAAAAGAAGTGGCAAAAATAAGTGAAAGTGACTCTGGTGCAATAGGGAAGAAGAGGATCCATGCTGCATTTATCACTCAATGCCTTGTTCTTATAAGAAGATCTTCTTTGCAATTGTTTCGCGACATTGGAAATTATTGGCTCCGTTTAGTTGTCTTCATTTTAATTGCTATAAGCATTGGTTCTATCTTCCATGACATTGGTTCAAGTAGTGGATCAGTATCTACTCAGGGGAGAGGTTCTCTGCTCACATTTCTTATTTCAGTTCTTACTTTCATGACCCTTGTTGGTGGATTCTCTCCACTTTTGGAGGAAATGAAGGTATTTGAACGAGAGAGATTGAACGGACACTATGGTGTTACCGCTTTTCTAATTGGCAATATATTCTCTGCTATTCCTTACATGCTAATGATCTCTCTAATTCCTGGTGGAATAGCATACTATCTTTGTGGAATGCACAAAGGACTAGCAAACTTTATATACTTCACTTCATTACTATTAGCAATTGTGATGTGGGTTGAGAGTCTTATGTTAGTTGTTGGAAGCATATCTCCAAATTATGTAATAGGAATGTTCATTACTGGTGGAATTGAAGGACTAATGATTTTAACTGGTGGATTCTATAGATTACCAAATGAACTACCTAAACCACTATGGAAATACCCTTTATACCATATATCTTTCCTTAAGTATGCATTTCAAGGATCATTCAAGAATGAATTTGAAGGGTTAACAATTTTGATAGGGACCAAAACTGTAAGTGGTAGGGAAATATTGGTTGAGACATGGCATGTTGAAATGGGTCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGTATGATTTTATTATATAGAGTTCTATTCTTGGTAATCACTAAGTGCAAGGAGAAGTTTAAGAATTTTGAACTTCCTCGAACTCTCCTAAGTGTAATTGACATGGGTGGTCATGATGGAGAAAAGGGTGGCATTACTGTGACATGGGAGAATTTGGAGGCAATTGTTACAAATGGAAAGAATAGAAAAATAATTCTGCATGGACTTACAGGTTATGCCCAGCCAGGGAAGCTTTTGGCTGTAATGGGACCTTCAGGCTGTGGCAAATCCACATTCCTTGATGCTTTAGCAGGAAGATTGAAATCAAACATACAACAATCAGGGAACATTCTAATCAATGGCAAAAAACAAACACTGGCGTATGGAACATCGGGTTATGTAACACAAGATGATGCTATGCCGTCAACTTTAACAGCTGGTGAAACTTTATACTACTCAGCTCAACTTCAATTTCCAAACTCAATGTCCATAGCAGAGAAGAAGAAACAAGCAGATATCACACTCAGAGAAATGGGCCTGCAAGATGCTATTAACACAAGGGTTGGAGGGTACGGTTCTAAGGGCCTAAGTGGGGGGCAAAAGAGAAGACTTAGCATTTGCATTGAGATCCTAACACACCCCAGACTCCTTTTCCTTGACGAACCAACCAGTGGACTTGATAGTGCGGCTTCCTACTATGTTATGAGTAGAATTGCAAGTTTGAGCCTAAGGGATGGTATTCAAAGGACAATAGTTGCCTCCATTCATCAGCCTAGTAGTGAAGTTTTTGAGCTTTTCCATGACCTCTGCCTTCTTTCGTCTGGGGAGACGGTATATTTTGGTCCAGCATCTGAAGCAAATCAGTTTTATGCTTCAAATGGTTTCCCTTGCCCAACTCTCTATAATCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTTGAACAGGACACTGAAGAAGGATTTGGTAAAGGAGTAATTACTGAAGAAGCAATTGGTATCCTTGTAAATTCTTATAAGGCGTCAGAAATTAAAAGCCAAGTTCAGATCGAAGTGACAAAAATAAGTGAAAGTGATTTGGGTGCAATAAGGAATAGGAGGATCCATGCTCCATTTCAAACTCAGTGCATGGTTCTTATAAAAAGATCTTCTCTGCAATTGTATCGTGACATAAGCAATTACTGGTTACGTCTTGCTGTCTTTATTGCTTCGGCTATAAGCCTGGGCTCTATCTTCTATCACGTCGGTACAAGTAATCCATCTATTCAGGTCAGAGGGTCGCTAATTTCATTTTTTATATCACTCGTGTCTTTCATGACACTTGTTGGTGGATTCTCTCCCTTGATTGAGGAAATGAAGGTGTTTGAACGAGAGAGATTGAATGGGCACTATGGTATTTCTGCTTTTCTAATTGGCAACATATTATCTGCTATTCCTTACATGCTAATGATCTCTCTCATTTCCGGAGTAATAATTTGTTACCTTTCTGGACTGCACAAAGGACTAGAGCACTATTTATACTTTGCTTCTATCCTATTTGCCATTATGATGTGGGTTGAGAGTCTTATGATGGTTGTGGGGAGTATCTTCCCAAATTTTGTGATGGGTGTGATCATTGCTGGAGGAGTTGAAGGACTTGCAATTTTAACAGGTGGATTTTATCGACATCCTAACGATCTTCCAAAGCCATTATGGAAGTACCCTTGCTACTACATTTCCTTTCTCACATATGCTATACAAGGATCATTCAAGAATGAATTTGAAGGCTTAACATTTGCTGGGTATCAAGATGGAGGTACCACAACTGTTAGTGGTAAAGATATACTAACTGGGACATGGCATGTGCAAATGGGTCACTCTAAGTGGGTTGATCTTGTTATCATGTTTGGAATGATTGTTGTTTATCGAGTTCTATTCTTGGTCATTAATAAGGTCAAGGAGAAGTCAAAACCCACTCCTACCATCAATGGACCCAGAGCAAAAACTTTCTCTAGAACCAATATGGATGAACCCTAA 3819 0.3909 MVHLTTFGELLKSKEMSGNDVEGGNEEGNITVTWEKLRVTVPNGNKKRKAILQDLNGYAQPGRLLAVMGPSGSGKSTLLDALAGRLSSNLKHTGNILINGHKQALAYGISGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMSITEKREQADIILREMGLIDAVNTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIARLNLSDGIRRTIVVSIHQPSSEVFELFHDLCLLSSGETVYFGPAYDANQFFTANGFPCPTLHNPSDHYLRVINKDFEMDVEEGFGKGVTTEEAIDILVKTYKLSRIRSKVKKEVAKISESDSGAIGKKRIHAAFITQCLVLIRRSSLQLFRDIGNYWLRLVVFILIAISIGSIFHDIGSSSGSVSTQGRGSLLTFLISVLTFMTLVGGFSPLLEEMKVFERERLNGHYGVTAFLIGNIFSAIPYMLMISLIPGGIAYYLCGMHKGLANFIYFTSLLLAIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTGGFYRLPNELPKPLWKYPLYHISFLKYAFQGSFKNEFEGLTILIGTKTVSGREILVETWHVEMGHSKWVDLAIMFGMILLYRVLFLVITKCKEKFKNFELPRTLLSVIDMGGHDGEKGGITVTWENLEAIVTNGKNRKIILHGLTGYAQPGKLLAVMGPSGCGKSTFLDALAGRLKSNIQQSGNILINGKKQTLAYGTSGYVTQDDAMPSTLTAGETLYYSAQLQFPNSMSIAEKKKQADITLREMGLQDAINTRVGGYGSKGLSGGQKRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLSLRDGIQRTIVASIHQPSSEVFELFHDLCLLSSGETVYFGPASEANQFYASNGFPCPTLYNPSDHYLRIINKDFEQDTEEGFGKGVITEEAIGILVNSYKASEIKSQVQIEVTKISESDLGAIRNRRIHAPFQTQCMVLIKRSSLQLYRDISNYWLRLAVFIASAISLGSIFYHVGTSNPSIQVRGSLISFFISLVSFMTLVGGFSPLIEEMKVFERERLNGHYGISAFLIGNILSAIPYMLMISLISGVIICYLSGLHKGLEHYLYFASILFAIMMWVESLMMVVGSIFPNFVMGVIIAGGVEGLAILTGGFYRHPNDLPKPLWKYPCYYISFLTYAIQGSFKNEFEGLTFAGYQDGGTTTVSGKDILTGTWHVQMGHSKWVDLVIMFGMIVVYRVLFLVINKVKEKSKPTPTINGPRAKTFSRTNMDEP* 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1646 1272 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 278 IPR003439 GO:0005524
Tpr3g1646 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 269 IPR027417 -
Tpr3g1646 1272 ProSitePatterns ABC transporters family signature. 796 810 IPR017871 GO:0005524
Tpr3g1646 1272 MobiDBLite consensus disorder prediction 1252 1272 - -
Tpr3g1646 1272 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 654 899 IPR003439 GO:0005524
Tpr3g1646 1272 SMART AAA_5 61 254 IPR003593 -
Tpr3g1646 1272 SMART AAA_5 682 875 IPR003593 -
Tpr3g1646 1272 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 649 1253 - -
Tpr3g1646 1272 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 8 630 - -
Tpr3g1646 1272 Pfam ABC-2 type transporter 856 923 IPR043926 GO:0140359
Tpr3g1646 1272 Pfam ABC-2 type transporter 235 292 IPR043926 GO:0140359
Tpr3g1646 1272 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Tpr3g1646 1272 Pfam ABC transporter 674 824 IPR003439 GO:0005524
Tpr3g1646 1272 CDD ABCG_EPDR 30 260 - -
Tpr3g1646 1272 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 8 630 - -
Tpr3g1646 1272 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 649 1253 - -
Tpr3g1646 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 659 890 IPR027417 -
Tpr3g1646 1272 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524
Tpr3g1646 1272 Gene3D - 31 285 IPR027417 -
Tpr3g1646 1272 Gene3D - 653 897 IPR027417 -
Tpr3g1646 1272 Pfam ABC-2 type transporter 354 569 IPR013525 GO:0016020|GO:0140359
Tpr3g1646 1272 Pfam ABC-2 type transporter 975 1188 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1646 Tpr-Chr3 14703368 14717613 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1646 672 834 Calmodulin-binding Proteins AT2G36910 32.941 3.89e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1646 K05681 - gmx:100794527 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1646 3 14703368 14717613 Tpr3g1646 3 14703368 14717613 ECH