Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1644 ATGAGTTCTTTTCTTCAACTTCAAGCTAATGATTATGAGCAAGACAATAGCTCCAAAATTTTGCCAACCAATGTGGAATTTGAGTCCACATTTGAGGTGGAAGCAACCAAATCAGTAGAAAATGATAAGGTGGAAGGAATTTTCTTGACATGGGAGGATCTTTGGGTGACTGTTTCAAATGGAAACAATGGAAGGAAACCAATACTTGAAGGTCTAAAAGGCTATGCTAAACCAGGACAACTCTTAGCTATAATGGGCCCTTCTGGTTGTGGCAAATCCACTCTTCTTGATGCTTTAGCAGGAAGATTAGGCTCTAAGACAAAACAAACAGGGAAGATACTAATAAATGGCCGCAAACAAGCACTAGCTTATGGAACATCTGCATATGTAACAGAAGATGATACAATTTTGAATACTCTAACAGTTAGAGAAGCTGTGTACTATTCAGCTCAACTTCAATTACCAGATTCAATGTCCAAATTAGAGAAACAAGAGAGAGCAGATTTCATAATCAAAGAAATGGGGCTACAAGATTCAATCAACACAAGAATTGGAGGGTGGAAATCTAAAGGCATAAGTGGTGGACAAAAGAGGAGAGTTAGCATTTGCATTGAGATATTAACACATCCTAGACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCATCTTATCATGTTATGAGTAGAATTTCTGGTTTAAATAAAAAGGATGGTATTCAAATGACTATTATTGCATCTATTCATCAACCAAGTAACGTAATTTTTCGACTTTTTCATAACCTTTGTCTTCTGTCTTCTGGGAAAACAGTTTACTTTGGACCTGTCTCTGCTGCAAATAAGTTTTTTTCATCAAATGGTTTTCCCTGCCCAAGTCTCCAGAGTCCTTCTGATCACTTTGTAAAAACAATTAACAATGATTTTGAAGAGGACCCTGAGAAAGGACTAGGTGGAGGGCTAAGCACAGAGGAAGCAATTCACATTCTTGTTAAATCATATGATTCATCTCAAATTAGTCACCAAGTTCAAAAAGAACTTTATCAAATTAAAAAAAGGGTCTTGGACACAATGGAGAAGAAAAGACATGCTGATTTTTTAACTCAGTGTCTCATTCTAACAAGAAGATCTTTCGTGAATATGTATCGCGAAGCAGGCTATTATTGGTTACGCCTACTTATCTATGGTGCATTGGCTTTAAGTCTTGGTACAATGTTCTTTCACATTGGTTCAAGCAGTGAATCAATTCAGGCTAGAGGTTCATTGCTTGTGTTTGTTGTTACATTCTTGACATTCATAACTGTTTGTGGATTCCCTTCTTTTGTGGAAGATATGAAGGTATTTGAACGAGAGAGACTTAATGGACATTATGGTGTGACTGCATTTACCATTGGCAACACATTATCTGCAATTCCATTCTTGCTATTGATGTCATTAATCCCAGGAACATTGGTTTATTACCTAGTTGGACTTCACCAAGGACATGAACAATTTGTGTACTTTATATCTATGCTTTTTATATCTGTCTTCTTAGTTGAAGGTCTCATGATGATTGTTGCAAGTATGGTTCCAAATTTCCTAATGGGAATAATCATTGGTACTGGAATATTGGGAGTAATGATGTTAGATGGTGGATTCTATAGGCTACCAAGTGATATACCAAAGCCATTTTGGAAATACCCTTTGCACTATATTTCACTTCACAAATATGCATATCAAGGATTGTTCAAGAATGAGTTTCAAGGTCTAATATTCACTAGTAGTAATCAAGTGATAGTTAGTGGTGAAGAGATATTGAAAAACTTTTGGCAAATGGAAATGAATTACTCAAAGTGGGTGGATTTTACTATTTTGGTTGGAATGGCTCTAGTGTATAGAATTATGTTTTTGATTATTATCAAGAGCTTTGAGAAGTTGAAGCCTATTGTTGCAGCTATTAATTGTCCTCAAGAAATTTTTAGGTTCACTAAAGTGACTAGGAGCAGTGAGATTGATTAG 2004 0.3598 MSSFLQLQANDYEQDNSSKILPTNVEFESTFEVEATKSVENDKVEGIFLTWEDLWVTVSNGNNGRKPILEGLKGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSKTKQTGKILINGRKQALAYGTSAYVTEDDTILNTLTVREAVYYSAQLQLPDSMSKLEKQERADFIIKEMGLQDSINTRIGGWKSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYHVMSRISGLNKKDGIQMTIIASIHQPSNVIFRLFHNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQSPSDHFVKTINNDFEEDPEKGLGGGLSTEEAIHILVKSYDSSQISHQVQKELYQIKKRVLDTMEKKRHADFLTQCLILTRRSFVNMYREAGYYWLRLLIYGALALSLGTMFFHIGSSSESIQARGSLLVFVVTFLTFITVCGFPSFVEDMKVFERERLNGHYGVTAFTIGNTLSAIPFLLLMSLIPGTLVYYLVGLHQGHEQFVYFISMLFISVFLVEGLMMIVASMVPNFLMGIIIGTGILGVMMLDGGFYRLPSDIPKPFWKYPLHYISLHKYAYQGLFKNEFQGLIFTSSNQVIVSGEEILKNFWQMEMNYSKWVDFTILVGMALVYRIMFLIIIKSFEKLKPIVAAINCPQEIFRFTKVTRSSEID* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1644 667 SMART AAA_5 78 271 IPR003593 -
Tpr3g1644 667 Pfam ABC transporter 72 220 IPR003439 GO:0005524
Tpr3g1644 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 38 661 - -
Tpr3g1644 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 295 IPR003439 GO:0005524
Tpr3g1644 667 Pfam ABC-2 type transporter 370 582 IPR013525 GO:0016020|GO:0140359
Tpr3g1644 667 Gene3D - 49 287 IPR027417 -
Tpr3g1644 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 284 IPR027417 -
Tpr3g1644 667 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 38 661 - -
Tpr3g1644 667 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524
Tpr3g1644 667 Pfam ABC-2 type transporter 252 307 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1644 Tpr-Chr3 14693460 14697616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1644 68 277 Calmodulin-binding Proteins AT2G36910 26.168 6.04e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1644 K05681 - gmx:100789571 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1644 3 14693460 14697616 Tpr3g1644 3 14693460 14697616 ECH