Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1643 ATGAGTTTCCTTCTTCAATCTCAAGCTATTGATTGTGAGCAAGACAATATCTCCAAAATTTTGCCAACTAATGTGGAATTTGAGTCCACATTTGAGGTGGAAGCCACCAAATCAGTAGAAAATTATAAGGTGGATGGAATTTTCTTGACATGGGAAGATCTTTGGGTGACTGTTTCAAATGGAAACAATGGAAAGAAACCAATACTTGAAGGTCTTAAAGGCTATGCTAAACCAGGACAACTCTTAGCTATAATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATGCTTTAGCAGGAAGATTAGGATCTAAGACAAAACAAACTGGGAAGATCCTAATCAATGGCTGCAAACAAGCACTAGCTTATGGAACATCTGCTTATGTAACAGATGATGATACAATTTTGAATACTCTAACTGTTAGAGAAGCTGTGTACTATTCAGCTCAGCTTCAGTTACCAGATTCAATGTCCAAATCAGAGAAACAAGAAAGAGCTGATTTTACAATCAAAGAAATGGGGCTACAAGATGCAATCAACACAAGAATTGGAGGGTGGAAATCCAAAGGCATTAGTGGTGGACAAAAGAGAAGAGTTAGCATTTGCATTGAGATATTAACACATCCTAGACTTCTCTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCTTATCATGTTATGAGTAGAATTTCTGATTTTAACAAAAAGGATGGTAGGCAAATGACTATTATTGCATCTATTCATCAGCCAAGTAACGAAATTTTTCGACTTTTTCATAACCTTTGTCTTCTGTCTTCTGGGAAAACAGTTTACTTTGGACCTGTCTCTGCTGCAAATAAGTTTTTCTCATCAAATGGTTTTCGCTGCCCAAGTCTCCAGAGTCCTTCTGATCACTTTGTGAACACAATTAACAAGGATTTTGAACAGGACCCTGAGAAAGGATTAGGTGGAGGGCTAAGCACAGAAGAAGCTATTAATATTCTTGTTAAATCATATGATTCATCTCAAATTAGCCACCAAGTTCAAAATGAACTTTCTCAAATTAAAAAAATGGTCACAGACACGATGGAGAAGAAAAACCATGCTGATTTCTTAACACAGTGTCTGATTCTTACAAGAAGATCTTTTGTGAATATGTATCGCGAAGCAGGCTATTATTGGTTACGCCTACTTATCTTTGGTGTATTGGCTTTAAGTCTTGGTACCATGTTCTTTCACATTGGTTCGAGCAACGAATCAATTCAGGCTAGAGCTTCACTCCTTGTGTTTGTTGTTACATTTTTGACATTCATAACTGTTGGTGGATTCCCTTCTTTTGTGGAGGATATGAAGGTGTTTGAACGAGAAAGACTAAATGGACATTATGGTGTCACTGCATTTACCATTGGAAACACATTATCTTCTATTCCATTCTTGCTATTGATGTCATTGATACCAGGACCATTGGTTTATTACCTAGTTGGACTTCACCAAGGACATGAACAATTTGTGTACTTCATATCTATGCTTTTCATTTCAGTCTTTTTAGTTGAAGGTCTCATGATGATTGTTGCAAGTATGGTTCCAAATTTCCTAATGGGAATAATAGTTGGTTCTGGAATTTTAGGGATGATGATGTTAGATGGTGGATTCTATAGACTACCAAGTGATATACCAAATCCATTTTGGAAATACCCTTTGCACTATATTTCATTTCATAAATATGCATATCAAGGATTGTTCAAGAATGAGTTTCAAGGTCTAACATTCACTACTAGCAATCAAGTTATAGTTAGTGGTGAAGATATATTGAAAAACTTGTGGCAAATGGAAATGAATTACTCAAAGTGGGTTGATTTTACTATTTTGGTTGGAATGGCTTTATTTTATAGAATTCTTTTTTTGATTATCATCAAGAGCTTTGAAAAGGTGAAGCCTATGGTTGCAGCAATTAATTGTTCTCAGGAAAATTTGAGGTTCACTAAAGTGACTTGA 1986 0.3615 MSFLLQSQAIDCEQDNISKILPTNVEFESTFEVEATKSVENYKVDGIFLTWEDLWVTVSNGNNGKKPILEGLKGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSKTKQTGKILINGCKQALAYGTSAYVTDDDTILNTLTVREAVYYSAQLQLPDSMSKSEKQERADFTIKEMGLQDAINTRIGGWKSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYHVMSRISDFNKKDGRQMTIIASIHQPSNEIFRLFHNLCLLSSGKTVYFGPVSAANKFFSSNGFRCPSLQSPSDHFVNTINKDFEQDPEKGLGGGLSTEEAINILVKSYDSSQISHQVQNELSQIKKMVTDTMEKKNHADFLTQCLILTRRSFVNMYREAGYYWLRLLIFGVLALSLGTMFFHIGSSNESIQARASLLVFVVTFLTFITVGGFPSFVEDMKVFERERLNGHYGVTAFTIGNTLSSIPFLLLMSLIPGPLVYYLVGLHQGHEQFVYFISMLFISVFLVEGLMMIVASMVPNFLMGIIVGSGILGMMMLDGGFYRLPSDIPNPFWKYPLHYISFHKYAYQGLFKNEFQGLTFTTSNQVIVSGEDILKNLWQMEMNYSKWVDFTILVGMALFYRILFLIIIKSFEKVKPMVAAINCSQENLRFTKVT* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1643 661 Pfam ABC-2 type transporter 252 308 IPR043926 GO:0140359
Tpr3g1643 661 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 33 654 - -
Tpr3g1643 661 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 33 654 - -
Tpr3g1643 661 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 295 IPR003439 GO:0005524
Tpr3g1643 661 Pfam ABC-2 type transporter 370 582 IPR013525 GO:0016020|GO:0140359
Tpr3g1643 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 285 IPR027417 -
Tpr3g1643 661 Gene3D - 49 317 IPR027417 -
Tpr3g1643 661 SMART AAA_5 78 271 IPR003593 -
Tpr3g1643 661 Pfam ABC transporter 72 220 IPR003439 GO:0005524
Tpr3g1643 661 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1643 Tpr-Chr3 14675804 14680048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1643 68 277 Calmodulin-binding Proteins AT2G36910 26.047 2.20e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1643 K05681 - gmx:100789571 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1643 3 14675804 14680048 Tpr3g1643 3 14675804 14680048 ECH