Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1642 ATGGCTTCTTCCCTATCTCTCCCATCTTGTTCTGAAATTAAAATCAGTAGTTCAGAAAAATCATTCAAACAAAGTGTTCTAGACATTGAAACTACAACCACATTAGATGAAGTTGATGGTATATACTTAACATGGAAGGATATATGGGTAAATACAATTTCATCAAATGGAAAGAATGGAAGCAAATCAATTCTTCAAGGATTAACTGGTTATGCTAAGCCTGGCCAACTCTTGGCCATAATGGGTCCTTCCGGCTGTGGCAAGTCTACGTTACTCGATACTTTAGCCGGGAGATTGAGCTCAAGCGCAAGACAAACAGGGGAAATTTTGATCAATGGTCACAAACAAGAACTGTCTTATGGAACTTCGGCTTATGTCACACAAGATGATATATTATTGGCAACTTTAACCGTTGGAGAAGCAGTGTACTATTCAGCTCAACTTCAATTGCCTGACACAATGTCAAAGGAGGAAAAGAAAGAGAGAGCTGATCTTACAATCAAAGAAATGGGTCTACAAGATGCTATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGCATAAGTGGGGGTCAAAAAAGGAGAGTGAGCATATGCATTGAGATCATAACACATCCAAGACTTCTGTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCTTATTATGTTATGAAAAGAATTGCTACTTTGGATCTTAGAGATGGAATTCAGAGGACTATTATCACTTCAATCCATCAACCTAGTAATGAAGTTTTTCAACTTTTTCATAATCTTTGTCTTCTGTCTTCTGGTAGAACAGTTTACTTTGGACCAGTCTCTGCTGCATGTGAGTTTTTCTCATCAAATAATTCTCCCTGCCCAAGTCTACAGAGTCCTTCTGATCACTTTGTGAACACAATTAACAAGGATTTTGAACAGGACCCTGAGAAAGGACTAGGTGGAGGACTAAGCACAGAGGAAGCAATTCACATTCTTGTTAAATCATATGATTCATCTGAAATTAGTCACCAAGTTCAAAAAGAACTTTCTGAAATTAAAAAAAGGGTCTCGCACACGATAGAGAAGAAAAGACATGCTGATTTTCTTACTCAGTGTCTCATTCTTACAAGAAGATCTTTTGTTAATATGCATCGCGAAGCAGGCTATTATTGGTTACGCCTACTTATCTATGGTGTATTGGCTTTAAGTCTTGGTACCATGTTCTTTCACATTGGTTCGAGCAATGAATCAATTCAGGCTAGAGCTTCACTCCTTGTGTTTGTTGTTACATTTGTGACATTCGTAACTGTTGCTGGATTCCCTTCTTTTGTGGAGGATATGAAGGTATTTGAACGAGAAAGACTAAGTGGACATTATGGTGTCACTGCATTTACCATTGGAAACACATTATCTTCAATTCCATTCTTGCTATTGATGTCATTGATCCCAGGAACATTGGTTTATTACCTAGTTGGACTTCACCTAGGACATGAACAATTTCTGTACTTCATATCTATGCTTTTCATTTCAGTCTTTTTAGTTGAAGGTCTCATGATGATTGTTGCAAGTATGGTTTCAAATTTCCTAATTGCAATAATCATTGGTACTGGAATTTTAGGGATGATGATGTTAGATGGTGGATTCTATAGACTACCAAGTGATATACCAAATCCATTTTGGAAATACCCTTTGCACTATATTTCATTTCATAAATATGCATATCAAGGATTGTTCAAGAATGAGTTTCAAGGTCTAACATTCACTACTAGCAATCAAGTTATAGTTAGTGGTGAAGATATATTGAAAAACTTGTGGCAAATGGAAATGAATTACTCAAAGTGGGTGGATTTTACTATTTTGGTTGGAATGGCTTTAGTGTATAGAATTCTCTTTTTGATTATTATCAAGAGCTTTGAGAAGGTGAAGCCTATGGTTGCAGGAATTAATTGTTCTCAAGAAAAATTTTAG 1956 0.3661 MASSLSLPSCSEIKISSSEKSFKQSVLDIETTTTLDEVDGIYLTWKDIWVNTISSNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLSSSARQTGEILINGHKQELSYGTSAYVTQDDILLATLTVGEAVYYSAQLQLPDTMSKEEKKERADLTIKEMGLQDAINTRIGGWGVKGISGGQKRRVSICIEIITHPRLLFLDEPTSGLDSAASYYVMKRIATLDLRDGIQRTIITSIHQPSNEVFQLFHNLCLLSSGRTVYFGPVSAACEFFSSNNSPCPSLQSPSDHFVNTINKDFEQDPEKGLGGGLSTEEAIHILVKSYDSSEISHQVQKELSEIKKRVSHTIEKKRHADFLTQCLILTRRSFVNMHREAGYYWLRLLIYGVLALSLGTMFFHIGSSNESIQARASLLVFVVTFVTFVTVAGFPSFVEDMKVFERERLSGHYGVTAFTIGNTLSSIPFLLLMSLIPGTLVYYLVGLHLGHEQFLYFISMLFISVFLVEGLMMIVASMVSNFLIAIIIGTGILGMMMLDGGFYRLPSDIPNPFWKYPLHYISFHKYAYQGLFKNEFQGLTFTTSNQVIVSGEDILKNLWQMEMNYSKWVDFTILVGMALVYRILFLIIIKSFEKVKPMVAGINCSQEKF* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1642 651 Pfam ABC-2 type transporter 248 304 IPR043926 GO:0140359
Tpr3g1642 651 Pfam ABC-2 type transporter 366 578 IPR013525 GO:0016020|GO:0140359
Tpr3g1642 651 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524
Tpr3g1642 651 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 291 IPR003439 GO:0005524
Tpr3g1642 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 649 - -
Tpr3g1642 651 Pfam ABC transporter 66 216 IPR003439 GO:0005524
Tpr3g1642 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 281 IPR027417 -
Tpr3g1642 651 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 5 649 - -
Tpr3g1642 651 SMART AAA_5 74 263 IPR003593 -
Tpr3g1642 651 Gene3D - 48 369 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1642 Tpr-Chr3 14648950 14656917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1642 75 251 Calmodulin-binding Proteins AT2G36910 30.688 8.90e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1642 K05681 - gmx:100789571 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1642 3 14648950 14656917 Tpr3g1642 3 14648950 14656917 ECH