Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1641 ATGGCTTCTTCCCTATCTCTCCCATCTAGTTGTGAAATTAAAATCAGTAGTTCAGAAAAATCACTCCAACGAAGTGTTCTAGACATTGAAACTACAACCACATTAGATGAAGTTTCGTCTAATGGTATATGCTTAACATGGAAGGATATATGGGTAAATACAATTTCATCAAATGGAAAGAATGGAAGCAAATCAATTCTTCAAGGATTAACTGGTTATGCTAAGCCTGGCCAACTCTTGGCCATAATGGGTCCTTCCGGCTGTGGCAAGTCTACGTTACTCGATACTTTAGCCGGGAGATTGAGCTCAAACACAAGACAAACAGGAGAAATTTTAATCAATGGTCACAAACAAGAACTGTCTTATGGAACCTCGGCTTATGTGACACAAGATGATACATTATTAACAACCTTAACGGTTAAAGAAGCAGTATACTACTCAGCTCAACTTCAATTGCCTGACACAATGTCAAAGGAAGAGAAGAAAGAAAGAGCAGACTTTACAATCAAAGAAATGGGTCTACAAGATGCAATTAACACAAGAATTGGAGGGTGGGGTGTAAAAGGAATAAGTGGGGGTCAAAAAAGAAGAGTGAGCATTTGCATAGAGATCATAACACGTCCAAGGCTTCTGTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCTTATTATGTCATGAAAAGAATTGCTACTTTGGATCTTAGAGATGGAATTCAGAGGACTATTATCACTTCAATCCATCAACCTAGTAATGAAGTTTTTCAACTTTTTCATAATCTTTGTCTTCTGTCTTCAGGAAGAACTGTTTACTTTGGACCTGCCTCAGCTGCATGTGAGTTTTTTGCTTTGAATGGATTTCCTTGTCCTCCTCTCCAAAATCCATCTGATCATTTACTTAAAGCTATAAACAAGGATTTTGATCAGGATATTGAGGCGCAGACCGGAACAATGACCACAGAAGAAGCAATTTGTGTCCTTGTGAGTTCATATAAATCATCTGAAAGAAATCAAGATGTTCATAATGAAGTAGCAGTATTATCTAAAAAGGACACAAGCTCAGTGGATCATAAGAAGAAAGGGCATGCAGGGTTTCTCAATCAATGTTTAGTTCTTACCGAACGGTCATCGGTGAACATGTTTCGTGATCTCGGCTATTACTGGTTACGTCTGGGAATATATGTTGCATTGGCTATAAGTTTAGGCACTGTTTACTATGATTTGGGTACAAGTTATGGCTCAATTAAGGATCGAGGTTCACTTCTTTCATTTGTTTCTGGATTCTTAACTTTCATGAGCATTGGTGGATTCCCTTCCTTTGTGGAAGATATGAAGGTATTTCAAAGAGAAAGACAAAATGGGCATTATGGTGTGATTGCATATGTGATTGGGAACACATTTTCATCAATTCCATTTGTTTTATTGGTTACAATAATTCCTGCAGTTATAACCTATTACCTCTCTGGTCTTCAAAAAGGATATGAACACTTTTTATACTTTGCTAGTGTTCTATTTTCTAGTCTAATGTTAGTGGAAAGTCTTATGATGATAGTTGCAAGCATTGTTCCTAACTATCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATCATGATTTTAATTGGTGGATTCTTCAAATTGCCACATGATCTTCCTAAGATATTTTGGAGATATCCATTACACTATGTTGCATTTCATACATATGTGTTTGAAGGATTATTCAAGAATGAGTATGAAGGACTAAAATTTCCTAATAAAAATGGACCACAAGGCACAAATAGTTACATTACTGGTGAAGTGATTTTGAGAGATACTTGGCAAAGTAACATGAGTTACTCAAAATGGGTTGATCTTGCAATTTTGCTAGGAATGATTGTTTTGTATCGTGTTTTGTTTCTTATGATCATCAAGATTACAGAGAAAATGAAGCCTATTGTTGGATCATTATTATCTTGCACGTTTGTGTCTCCCAAAACAACAATACATGTCGTGGAAAATCCTAATGCCACTCCTTCGTATCAAGAAGTCATATAG 2043 0.3651 MASSLSLPSSCEIKISSSEKSLQRSVLDIETTTTLDEVSSNGICLTWKDIWVNTISSNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLSSNTRQTGEILINGHKQELSYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSKEEKKERADFTIKEMGLQDAINTRIGGWGVKGISGGQKRRVSICIEIITRPRLLFLDEPTSGLDSAASYYVMKRIATLDLRDGIQRTIITSIHQPSNEVFQLFHNLCLLSSGRTVYFGPASAACEFFALNGFPCPPLQNPSDHLLKAINKDFDQDIEAQTGTMTTEEAICVLVSSYKSSERNQDVHNEVAVLSKKDTSSVDHKKKGHAGFLNQCLVLTERSSVNMFRDLGYYWLRLGIYVALAISLGTVYYDLGTSYGSIKDRGSLLSFVSGFLTFMSIGGFPSFVEDMKVFQRERQNGHYGVIAYVIGNTFSSIPFVLLVTIIPAVITYYLSGLQKGYEHFLYFASVLFSSLMLVESLMMIVASIVPNYLMGIITGAGIQGIMILIGGFFKLPHDLPKIFWRYPLHYVAFHTYVFEGLFKNEYEGLKFPNKNGPQGTNSYITGEVILRDTWQSNMSYSKWVDLAILLGMIVLYRVLFLMIIKITEKMKPIVGSLLSCTFVSPKTTIHVVENPNATPSYQEVI* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1641 680 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 7 674 - -
Tpr3g1641 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 7 674 - -
Tpr3g1641 680 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524
Tpr3g1641 680 Pfam ABC-2 type transporter 250 352 IPR043926 GO:0140359
Tpr3g1641 680 Pfam ABC-2 type transporter 370 581 IPR013525 GO:0016020|GO:0140359
Tpr3g1641 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 285 IPR027417 -
Tpr3g1641 680 SMART AAA_5 76 265 IPR003593 -
Tpr3g1641 680 Pfam ABC transporter 68 218 IPR003439 GO:0005524
Tpr3g1641 680 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 293 IPR003439 GO:0005524
Tpr3g1641 680 Gene3D - 48 375 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1641 Tpr-Chr3 14611716 14639107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1641 77 253 Calmodulin-binding Proteins AT2G36910 32.086 1.18e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1641 K05681 - gmx:100794527 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1641 3 14611716 14639107 Tpr3g1641 3 14611716 14639107 ECH