Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1640 ATGACTTCTCCCCTTATTTCAGCTGTCTCTAATAATATTTTAGAGATTGAAGCAAGTAGCAGAGAGAAGGTATCAAGCAATAAAGGAGGAGAAGAAGAGAATGGAATTAGTTTGACATGGAAGGATCTATGGGTGACTGTTGCTGCTTCTTCTTCAAAAGGAAAGATGAAAGAAAACAAATCAATTCTTGATGGTCTAACTGGTTATGCAAAACCAGGTCAACTTTTGGCCATAATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGGAGATTAGATTCTAACACAAGACAATCAGGGGAGATTTTGATCAATGGCAACAAACAAGCATTGGCTTATGGAACCTCGGCATATGTGACACAAGATGATACATTATTAACAACCTTAACCGTTAAAGAAGCAGTATACTACTCAGCTCAACTTCAATTGCCTGACACAATGTCAAAGCAAGAGAAGAAAGAAAGAGCAGACTTTACAATCAAAGAAATGGGTCTACAAGATGCAATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATAAGTGGAGGTCAAAAAAGGAGAGTCAGCATTAGCATTGAGATTCTAACACGTCCTAGACTTCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCTGCTTCTTACTATGTTATGAAAAGAATAGCTTCTTTGGATAAAAAAGATGGAATTCAAAGGACTATTATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCATAATCTTTGTCTTTTGTCTTCAGGTAAAACTGTTTATTTTGGACCTGCTTCTGCTGCTTCTGAGTTTTTTGCTTTGAATGGATTTCCTTGTCCTCCTCTCCAAAATCCATCTGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGATATTGAGATGGATTTAGCAGAGATCAACAAAACAATTTCCACAGAGCAAGCAATTGGTATCCTTGTAAGCTCCTATAAATCATCTGAAAGAAACCAAGAAGTTAAAAATGAAGTAGCAGTACTATCTAATAAGGATAACAATTCAACATACAAGATGAAAAAACATGCTGGCTTTCTTAATCAATGCTTAGTTCTTACAAGAAGATCTTTTGTGAACATGTTTCGTGATCTTGGCTATTACTGGTTACGCCTTGGCATATATATAGCATTGTGTATAAGTTCAGCCACTATCTTTAATGGTTTGGATAAAAGTTATGGCTCAATTCAGGATAGAAGTTCATTTCTTATGTTTGTGTTTTCATTCCTTACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGATATGAAGGTATTTGAACGTGAAAGACTAAATGGACATTATGGTGTTACTGCATATGTGATTGGGAACACATTTTCATCTATTCCATATTTGTTGATGATTTCACTGATTCCTGGAGCTATAGCATATTTCCCTCCTGGACTTCAAAACGGATTTGAACACTTTCTATATTTTTTTTGTGCTCTATTTTGTTGTCTAATGTTAGTAGAGAGTCTTATGATGATAGTTGCAAGCATTGTTCCTGATTTTCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATGATGATGTTGGCTGGTGGATTCTTTAGATTGCCAAATGATCTTCCAAAGCCATTTTGGAGATATCCTATGTACTATATTTCATTCCATAGATATGCTTTTCAAGGATCTTATAAAAATGAGTTTGAAGGCCTAAAATTTAATAGAGGTGATGGAATTGGTGGTTACATTAGTGGTGAAGAGATTTTGAGAAATACATTTCATGTAGATATGAGTTACTCAAAGTGGGTTGATCTTGGAATATTGTTGGGTATGATTGTTTTGTATAGAGTTTTGTTTTTGATTATTATCAAAACTATTGAGAAGCTTAAACCTTTTGTTGTATCACTTATGTCAGTGTCTCCTAGGAAAAAATTACAAGTATTGGAGAAACCTAGTGACACTCCTTTACATGGAGAAATTGTATAA 2022 0.3516 MTSPLISAVSNNILEIEASSREKVSSNKGGEEENGISLTWKDLWVTVAASSSKGKMKENKSILDGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLDSNTRQSGEILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSKQEKKERADFTIKEMGLQDAINTRIGGWGVKGISGGQKRRVSISIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIEMDLAEINKTISTEQAIGILVSSYKSSERNQEVKNEVAVLSNKDNNSTYKMKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALCISSATIFNGLDKSYGSIQDRSSFLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTFSSIPYLLMISLIPGAIAYFPPGLQNGFEHFLYFFCALFCCLMLVESLMMIVASIVPDFLMGIITGAGIQGMMMLAGGFFRLPNDLPKPFWRYPMYYISFHRYAFQGSYKNEFEGLKFNRGDGIGGYISGEEILRNTFHVDMSYSKWVDLGILLGMIVLYRVLFLIIIKTIEKLKPFVVSLMSVSPRKKLQVLEKPSDTPLHGEIV* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1640 673 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 13 669 - -
Tpr3g1640 673 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 13 669 - -
Tpr3g1640 673 Pfam ABC transporter 64 214 IPR003439 GO:0005524
Tpr3g1640 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 280 IPR027417 -
Tpr3g1640 673 CDD ABCG_EPDR 35 271 - -
Tpr3g1640 673 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Tpr3g1640 673 Gene3D - 45 318 IPR027417 -
Tpr3g1640 673 Pfam ABC-2 type transporter 369 580 IPR013525 GO:0016020|GO:0140359
Tpr3g1640 673 SMART AAA_5 72 261 IPR003593 -
Tpr3g1640 673 Pfam ABC-2 type transporter 246 307 IPR043926 GO:0140359
Tpr3g1640 673 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 289 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1640 Tpr-Chr3 14603559 14608539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1640 62 274 Calmodulin-binding Proteins AT2G36910 28.767 1.49e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1640 K05681 - gmx:100813462 966.452