Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1629 ATGGCGGACCCTCCTTCTCGCGCACTACCTCCTCGACCAGATTTTCAGCAGTTACAATTCGAAGCCCAGCATCGGTGGTTACGCCCTGCGGAAATATTGGAAATTCTTCGTAATTATCAGATGTTTCAAATCACACCTGAACCACCTAGCAGGCCACCAAGTGGATCACTTTTTCTTTTTGATCGGAAGGTTTTGAGATACTTCAGAAAGGATGGACACAACTGGAGAAAGAAGAAAGACGGAAAAACTGTGAGGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTATTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAGAATGAAAATTTTCAGAGGCGGAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAGACCAATATTGGTGCAAGCACAGATACTAAAGGGGTTACATCAGATTCTCAAAACGGCAGTTCTGTGTCATCTGGCTTTCCTGCAAATTATGGTAACATGCCTTCGGGAAGTGCGGATGCCATGAGCCCAACAAGCACTTTAACTTCTTTATGTGAAGATGCAGATTCAGAGGATATTCATCAAGCAAGCTCGGGATTTCACACTTTTCGTGAGTCACAAAATCTGGGGAATGGTCCACTGATGGATAAGGTTGATGCTCGTTCAAATAGTTCATATCTTACACATCCCTTTTCAGGTGATCATGGTCAGTTATCGTTTTCAGGACCAAATTACCTCCCACTTGTTCAGGGGGGTAAATCCAATCAAAGTGGTGCTACATATGCCGAGGGTCAGAGAGCACTCAACATAGCATCCTGGGACAATGTCATGGAGAAATCTGCAGGATTGCATACTGATCCCTCCCTTGTATCATCTAATTCTATTCCATCAAGTTCAATGGGGAACATCATTGAACAAGAACATTCCGTCTTTACTGAAGGAAGGGCCTCACAGAGTCTCCATTCAAATTGGCAGATTCCTTTTGAAGACAATACAGGAGAATTTCCTAAATGGAGCTTTACTCAGTCGTTGAATTTGGAATTTGAATCTGATTATTCCACTGAACTACTGGGAAAAGAAACTAATAATGCAAGTTCAGAAATTGGTCCTGACCTATTTTGTTTTAATTTTGAACCAAAAGAGCAGTCTGTGCAGCAAAACTTGTCAAAGGAGCATACACCTGCACAATCTCAGGATGCACTAAAATCTGAGTATGGAGTTCATGGTGAACACAGTGCCAACTATTCCTTGAACATGAAGCATGCTTTTATGGAGGCAGAGAGCCTGAAGAAGGTTGATAGCTTCTCTAGGTGGATTTCTAAAGAACTTGCAGCGGTGGATGATCTGCACATGCAGTCTTCCCCTGGTATTTCATGGGGCACGGATGAATGTGGGAATGTGATAGATGATACCTCATTGAACCTGTCCCTGTCTCAAGACCAACTGTTTAGCATACATGATTTTTCACCTAAATGGGCTTATGCTGGATCAGAAATTGAGGTGTTGATTATTGGAACATTTTTGAAGAGTAAACCAGAGGTGGCAACATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAAGTACCAGCTACGGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCACCTCATGTGATTGGACGGATCCCTTTCTACGTAACCTTTTCGAATAGATTTGCTTGTAGTGAAGTTCGGGAATTTGAGTTTAGAGAGGGCTTTACTAGGAATGTAGATTTGGCAGATTTTTTTAACAGCTCAACTGAAATGACGCTTCATTTGCAACTGGAAGAGTTACTTACTTTGAATTCAGTGCATCTTTCCGATCAAGTTTTTGAGGATGATATGGAGAAAAGAAACTTGATTCTTAAGCTTATTTCATTGAAAGAGGAAGAGGAATATTTGAGTAATGAGGAGCCAACTGGAGACATGAATATATCAAAACACAGGATGGAGGCGCATATATTTCACAGGCAGGTTAAGGAGAAGCTGTACTCGTGGCTTCTTCACAAAGTAACTGAAACTGGTAAAGGGCCTCACGTGTTTGGTAAAGATGGGCAAGGTGTATTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCCATAGCACCAATTGTAACTTCTGGAGTTAATATAAACTTCCGTGATGTGAATGGATGTACGGCTCTACACTGGGCTGCATCCTGTGGCAGGGAGCGAACGGTTGTTCTCCTTGTCTCCATGGGTGCCGCTGCTGGAGCATTGACTGACCCATGTACAGCATTCCCTTCAGGAAGAACACCTGCAGATATTGCTTCTAGCTGTGGCCACAAAGGAATTTCAGGTTTTCTTGCCGAGTCATTATTAACTAGCCACCTTGAATCACTCACCGTGGATGATGTGAATAAAGATGGTGCAAAAGAAACTTTGGGAATGAAAGCAGTACAGACGATTTCAGAACGAATTGCAACACCTGTGTTTAGTGGGGATATACCAGATCCAGATGCTATCTGCCTTAAGGATTCTCTCGATGCTGTCCGGAATGCTACACAAGCTGCTGATAGAATACATCAAGTATATAGAATGCAATCATTTCAAAGAAAGCAGTTAGCTCAGTATGAAGGCGACGATGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCGGTTCTTGCCTCTAAGGCATCCAAATCTGGTCATGGGGATGGTTCAGTCAATGCTGCTGCAATACAAATACAGAAAAAGTTCCGTGGCTGGACAAAGAGAAAAGAATTCCTGTTCATTCGTCAAAGAGTTGTTAAAATTCAGGCTCATGTAAGAGGTCACCAAGTAAGAAAGAAGTATAAATCAATTATCTGGTCTGTGGGCATCCTGGAGAAGGTTGTAATACGGTGGAGGCGCAAGGGCAGCGGTTTACGTGGATTTCGACCAGATGCTGTTATTAAGGCCCCCAACCAACCAAGCAATGATCCTGTGAAGGAGGATGATTATGATTTTCTCAAGGAAGGGAGGAAACAGAGTGAAGAAAGGTTCCAAAAGGCCCTTTCAAGGGTTAAGTCCATGGTTCAGTATCCAGAGGCCCGGGCCCAGTACAGGCGACTGCTAAATGTAGTAGACGATTTCCGTCAAACCAAGCAGGCATCTACTTCAAGTCCGATAAGTTCGGAAGAGGCAGTTGATGGTGTTGAGGATTTGATTGATATTGACATGCTTTTCGATGATGATAATTTCTTACCTATAGTATTCGATTGA 3243 0.4274 MADPPSRALPPRPDFQQLQFEAQHRWLRPAEILEILRNYQMFQITPEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNIGASTDTKGVTSDSQNGSSVSSGFPANYGNMPSGSADAMSPTSTLTSLCEDADSEDIHQASSGFHTFRESQNLGNGPLMDKVDARSNSSYLTHPFSGDHGQLSFSGPNYLPLVQGGKSNQSGATYAEGQRALNIASWDNVMEKSAGLHTDPSLVSSNSIPSSSMGNIIEQEHSVFTEGRASQSLHSNWQIPFEDNTGEFPKWSFTQSLNLEFESDYSTELLGKETNNASSEIGPDLFCFNFEPKEQSVQQNLSKEHTPAQSQDALKSEYGVHGEHSANYSLNMKHAFMEAESLKKVDSFSRWISKELAAVDDLHMQSSPGISWGTDECGNVIDDTSLNLSLSQDQLFSIHDFSPKWAYAGSEIEVLIIGTFLKSKPEVATCNWSCMFGEVEVPATVLANGILCCQAPPHVIGRIPFYVTFSNRFACSEVREFEFREGFTRNVDLADFFNSSTEMTLHLQLEELLTLNSVHLSDQVFEDDMEKRNLILKLISLKEEEEYLSNEEPTGDMNISKHRMEAHIFHRQVKEKLYSWLLHKVTETGKGPHVFGKDGQGVLHLVAALGYDWAIAPIVTSGVNINFRDVNGCTALHWAASCGRERTVVLLVSMGAAAGALTDPCTAFPSGRTPADIASSCGHKGISGFLAESLLTSHLESLTVDDVNKDGAKETLGMKAVQTISERIATPVFSGDIPDPDAICLKDSLDAVRNATQAADRIHQVYRMQSFQRKQLAQYEGDDEFGLSDQQALSVLASKASKSGHGDGSVNAAAIQIQKKFRGWTKRKEFLFIRQRVVKIQAHVRGHQVRKKYKSIIWSVGILEKVVIRWRRKGSGLRGFRPDAVIKAPNQPSNDPVKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVDDFRQTKQASTSSPISSEEAVDGVEDLIDIDMLFDDDNFLPIVFD* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1629 1080 ProSiteProfiles IQ motif profile. 925 949 IPR000048 GO:0005515
Tpr3g1629 1080 Gene3D - 901 949 - -
Tpr3g1629 1080 SMART ANK_2a 762 791 IPR002110 GO:0005515
Tpr3g1629 1080 SMART ANK_2a 723 752 IPR002110 GO:0005515
Tpr3g1629 1080 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 3 1080 - -
Tpr3g1629 1080 SUPERFAMILY E set domains 490 576 IPR014756 -
Tpr3g1629 1080 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Tpr3g1629 1080 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Tpr3g1629 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 952 IPR027417 -
Tpr3g1629 1080 Gene3D - 656 793 IPR036770 -
Tpr3g1629 1080 ProSiteProfiles IQ motif profile. 903 931 IPR000048 GO:0005515
Tpr3g1629 1080 SMART iq_5 924 946 IPR000048 GO:0005515
Tpr3g1629 1080 SMART iq_5 901 923 IPR000048 GO:0005515
Tpr3g1629 1080 Pfam IQ calmodulin-binding motif 927 946 IPR000048 GO:0005515
Tpr3g1629 1080 Pfam IQ calmodulin-binding motif 904 922 IPR000048 GO:0005515
Tpr3g1629 1080 SMART CG_1_2 18 136 IPR005559 GO:0003677
Tpr3g1629 1080 ProSiteProfiles Ankyrin repeat region circular profile. 723 748 - -
Tpr3g1629 1080 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Tpr3g1629 1080 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 3 1080 - -
Tpr3g1629 1080 Gene3D Immunoglobulins 483 578 IPR013783 -
Tpr3g1629 1080 SUPERFAMILY Ankyrin repeat 679 784 IPR036770 -
Tpr3g1629 1080 Pfam IPT/TIG domain 490 563 IPR002909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1629 Tpr-Chr3 14498935 14506977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1629 1 1061 CAMTA Transcription Factor Family AT5G64220 51.050 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Tpr3g1629 CG-1 2.7e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1629 K21596 - gmx:100795682 1597.41