Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1628 ATGAATGAACAAGTTGAAGAAACAACGTATTATTCGGAGGGTAGTTGTGAGGTGGAATTAGAGGGCAGTTGTGAAGATAGTGATGGGGTTGAAAATGAAGATAATAATCGTCAAGAGGATCCAGAGCACATTAATGAAGATGTAGATGAGTCTGAAGATGGAGATGATAGTAGTGAAGAGAATTTTTTAGAGCAAAATAGTGAAATTGGAGATGATAATTGTGGTGACTATGTAGATAGTTGTGAGGAGGAAGAAATTGTGATAGATGATTTGGATGATATTTTGAAGATCGACATGAAAAATAGTGTCAGTAATGATGTTAGCAGGTACTCTTTTAGTAATTTGGAAGTGGCTTATCAATTTTACACAACATATTCCAAAATGAACGGTTTTTCTGTCCGCAAGAGCAGTGTTGTTAAAAGCAGCAAGGGTGAACTATTGCAACAAACTTTCATTTGTTCGAGCGCTGGATACAGAGAAAATAAGGGGCTGAATGTTGACAATCGAAAGCGACGCGAAAGGCGTGAAACAAGGTGTGGTTGTGCGGCAAAATTTCGTGTTCACATCGATATTGCTTCAGCTTCAGGGCGATGGTACGTGACTTTATTCACTGACGAACATAATCACGAAATGGTGAAAGATATATATTGTCAAATGTTACCGGGACACAGAAAAATCACAGAAGCTGATGCTCTCGTAATTCACAATCATGCAAAAGTTGGGATTAGGCCATCCACTACATATGGTGCGTTTGCACATGCTTCGGGGGGATACAACAAGGTACAGTTCATGAAGAAAGATCTTTATAATCAAGTTGGTAAACAAAAACGTCAACAAGTCTCTGATGCAAGTGCGGCGGTAAAGTATCTTAAAGAATTGAAGTCATAG 888 0.3863 MNEQVEETTYYSEGSCEVELEGSCEDSDGVENEDNNRQEDPEHINEDVDESEDGDDSSEENFLEQNSEIGDDNCGDYVDSCEEEEIVIDDLDDILKIDMKNSVSNDVSRYSFSNLEVAYQFYTTYSKMNGFSVRKSSVVKSSKGELLQQTFICSSAGYRENKGLNVDNRKRRERRETRCGCAAKFRVHIDIASASGRWYVTLFTDEHNHEMVKDIYCQMLPGHRKITEADALVIHNHAKVGIRPSTTYGAFAHASGGYNKVQFMKKDLYNQVGKQKRQQVSDASAAVKYLKELKS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1628 295 MobiDBLite consensus disorder prediction 45 66 - -
Tpr3g1628 295 Pfam FAR1 DNA-binding domain 120 212 IPR004330 -
Tpr3g1628 295 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 44 231 - -
Tpr3g1628 295 MobiDBLite consensus disorder prediction 30 44 - -
Tpr3g1628 295 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 44 231 - -
Tpr3g1628 295 MobiDBLite consensus disorder prediction 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1628 Tpr-Chr3 14492894 14493781 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g1628 FAR1 1.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1628 - - mtr:MTR_1g070355 208.379