Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1625 ATGGATTCTGCCTTATCCCTCACCACCACGGCGCAGATTCTACTCTTCAGAACACTCCACCGTCATTTCTCCGGCGCGCCTCCTCGTTCACTCCTCCGTCGTCGCAATCTGAAATACGCTGCTGTTACTTCATACAACAATCACTTTCGCATTCCGTCTTCTTCCACCTCTTTCACTTCTGTGCCGTTATCGCCCTCGCTCCGTAACTTCCACGCGCTGCTTTCACCAACTTCGTGCCGTACGCGCTGCGTTTCGAGCTCCGCTGCTTCTTTTGGTTCTTCTGCCGGCGGTGGAAATGGTGGTGCTGGAGTTGGAAATGGTGGTGGAGGTGGTGGTGGTGGTTCTGGTGGTGAGTCTGGTGATGTTAGAATCAATTTGGTTGGAGATGTGGCTCAAGAGCTTTCATCTCTTTCACCTGATGTTATCATTCTTGATGTTTCGGGAATGGTGTGTGGGGGATGTGCAGCATCTGTGAAAAAGATTCTGGAAAGTCAACCACAAGTGTCGTCTGCTAGTGTAAATTTAACAACAGAGACAGTAATAGTTTGGCCTGTATCCGAAGCAAAAACTGCACCAAATTGGCAAAAGCAATTAGGGAAGACACTTGCAGAACATTTAACTAGCTGTGGTTTCAATTCTTGCCTTCGAGATTCAACACGAGAAAATTTCTTACAAATTTTTGAAAGAAAGATGGAGGAAAGAAACAGACAATTAAAAGAAAGTGGTCGTGAGCTAGCTGTTTCCTGGGCTCTTTGTGCCGCGTGTCTCGTTGGCCATCTCTCTCATCTCTTTGCAGCAAAGGCACCATGGATCCATGCATTTCATTCTGTTGGGTTTCATCTATCCTTGTGTTTGCTTACGTTACTTGGTCCCGGCCGCCAACTTATCCTTGATGGCTTAAAAAGCCTTTTTAAAAGGGCGCCAAACATGAACAGCTTAGTTGGTCTTGGGGCTTTGTCATCATTCACAGTCAGTTCATTTGCGGTTTTGCTGCCGAAATTGGGTTGGAAGGCGTTTTTTGAGGAACCTATTATGCTGATTGCATTTGTCTTGTTGGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGCATATTGCCATCTAAAGCTCGCCTTCTAGTTAATAATGGGGAAACAGATGCTGCCTCAGTTGTTGAAGTTCCTTCTGACAGTCTTTCCATTGAAGATCAAATTATCATATTACCCGGAGATCGTATTCCAGCTGATGGGATTGTGAGAGCTGGTAGAAGTAGTGTAGATGAGTCAAGTTTCACCGGGGAGCCGCTGCCAGTAACCAAAGAACTTGGGAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTTACAATAGAGGTGCGGAGACCAGGTGGTGAGACTGCTATAGGAGACATTATTCGTCTAGTTGAAGAGGCACAAAGTAGAGAAGCTCCTGTACAACGGTTGGCTGACAAGGTAGCAGGATACTTCACGTATGGAGTAATGGCAATCTCTGTTACCACATTTACATTTTGGAGTGTGCTTGGCCCACAGATTTTACCTCCTGCTGTATACCAAGGAAGTGCAGTTTCACTGGCTTTGCAGCTTGCATGCAGTGTTCTGGTTATTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCTGTACTGGTTGGAACTTCTTTGGGAGCTAAAAGAGGATTACTTTTGCGTGGTGGAAACATTCTAGAGAAGTTTGCCTTGGTAAACACTGTTGTGTTTGACAAAACAGGGACCCTTACGATTGGTAAACCTGTTGTGACAAAGATCGTCACTCCCACATACATAGAAAATGCAAATTCAAGCCAAACTAAAATAAATGCTTTGTCTGATATTGAAGTTCTGAGGTTAGCAGCTGCTGTAGAATCAAACTCAGTACATCCAGTTGGGAAAGCAATTGTGGGTGCTGCTCAGGCAGTTAATTGTCATGATGCTAAGGTAACAGATGAAACATTCCTGGAAGAACCTGGATCTGGAGTTGTTGCTACCGTAAATAACAAAAAGGTCTCCGTTGGGACATTGGAATGGATAACCAGGCATGGAGTTAACAGTGGCATACATCAAGAAGTGGAGCGTAAAAACCAATCCTTTGTCTATGTTGGAGTTGATGATACTTTGGCTGGCCAGATTTATTTTGAAGACGAGATAAGGAAAGATGCAAGACATGTTGTTGACACCTTATCTAAGCAAGGTATTGATGTCTACATGCTGTCTGGAGACAAAAGGAATGCAGCTGAATATGTTGCATCTCTTGTTGGGATTCCCAAAGCAAAGGTGCTATCTGAAGTGAAACCAGAAGAGAAGAACAAGTTCATAAAGGAACTTCAGAAAGATAAGAACATTGTAGCTATGGTTGGTGATGGAATTAACGATGCAGCTGCTCTGGCTTCTTCACATATAGGTATTGCATTGGGTGGAGGTGTTGGAGCTGCCAGTGAAGTGTCTTCCATTGTATTGATGCACAATCATCTCTCACAGCTGCTTGATGCTTTGGAGCTTAGCAGGCTAACCATGAATACTGTAAAGCAAAATCTTTGGTGGGCTTTCATATACAACATTGTAGGGATTCCAATTGCAGCTGGAGCGTTATTTCCTGTAAATGGTACCATGCTGACTCCATCAATTGCAGGGGCTCTCATGGGGTTGAGTTCCATTGGCGTAATGACTAACTCGTTACTTTTGAGATTCAAGTTTTCCTTAAAGCAACAACAAATACATGGCACGTTGCCAAAGACCAAAACCTATGTTGAATCTGATCTGGCTCGTGGAAACAAGAAAATGAAGTATTCAAATTAG 2847 0.4394 MDSALSLTTTAQILLFRTLHRHFSGAPPRSLLRRRNLKYAAVTSYNNHFRIPSSSTSFTSVPLSPSLRNFHALLSPTSCRTRCVSSSAASFGSSAGGGNGGAGVGNGGGGGGGGSGGESGDVRINLVGDVAQELSSLSPDVIILDVSGMVCGGCAASVKKILESQPQVSSASVNLTTETVIVWPVSEAKTAPNWQKQLGKTLAEHLTSCGFNSCLRDSTRENFLQIFERKMEERNRQLKESGRELAVSWALCAACLVGHLSHLFAAKAPWIHAFHSVGFHLSLCLLTLLGPGRQLILDGLKSLFKRAPNMNSLVGLGALSSFTVSSFAVLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVNNGETDAASVVEVPSDSLSIEDQIIILPGDRIPADGIVRAGRSSVDESSFTGEPLPVTKELGSEVAAGSINLNGTLTIEVRRPGGETAIGDIIRLVEEAQSREAPVQRLADKVAGYFTYGVMAISVTTFTFWSVLGPQILPPAVYQGSAVSLALQLACSVLVIACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFALVNTVVFDKTGTLTIGKPVVTKIVTPTYIENANSSQTKINALSDIEVLRLAAAVESNSVHPVGKAIVGAAQAVNCHDAKVTDETFLEEPGSGVVATVNNKKVSVGTLEWITRHGVNSGIHQEVERKNQSFVYVGVDDTLAGQIYFEDEIRKDARHVVDTLSKQGIDVYMLSGDKRNAAEYVASLVGIPKAKVLSEVKPEEKNKFIKELQKDKNIVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMHNHLSQLLDALELSRLTMNTVKQNLWWAFIYNIVGIPIAAGALFPVNGTMLTPSIAGALMGLSSIGVMTNSLLLRFKFSLKQQQIHGTLPKTKTYVESDLARGNKKMKYSN* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1625 948 ProSitePatterns Heavy-metal-associated domain. 146 175 IPR017969 GO:0046872
Tpr3g1625 948 SFLD Haloacid Dehalogenase 573 852 - -
Tpr3g1625 948 Pfam haloacid dehalogenase-like hydrolase 586 814 - -
Tpr3g1625 948 PRINTS P-type cation-transporting ATPase superfamily signature 429 443 - -
Tpr3g1625 948 PRINTS P-type cation-transporting ATPase superfamily signature 590 604 - -
Tpr3g1625 948 PRINTS P-type cation-transporting ATPase superfamily signature 747 757 - -
Tpr3g1625 948 PRINTS P-type cation-transporting ATPase superfamily signature 802 821 - -
Tpr3g1625 948 PRINTS P-type cation-transporting ATPase superfamily signature 825 837 - -
Tpr3g1625 948 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 292 912 - -
Tpr3g1625 948 Gene3D - 360 483 - -
Tpr3g1625 948 PRINTS Copper-transporting ATPase signature 295 314 - -
Tpr3g1625 948 PRINTS Copper-transporting ATPase signature 343 362 - -
Tpr3g1625 948 PRINTS Copper-transporting ATPase signature 573 588 - -
Tpr3g1625 948 PRINTS Copper-transporting ATPase signature 779 796 - -
Tpr3g1625 948 Gene3D - 141 217 - -
Tpr3g1625 948 SFLD p-type atpase 573 852 IPR044492 -
Tpr3g1625 948 SUPERFAMILY Calcium ATPase, transduction domain A 392 479 IPR008250 -
Tpr3g1625 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 592 598 IPR018303 -
Tpr3g1625 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 344 890 IPR023298 -
Tpr3g1625 948 Gene3D - 582 852 IPR023214 -
Tpr3g1625 948 PANTHER ATP7, ISOFORM B 96 913 - -
Tpr3g1625 948 SUPERFAMILY HMA, heavy metal-associated domain 142 188 IPR036163 GO:0046872
Tpr3g1625 948 SUPERFAMILY HAD-like 588 909 IPR036412 -
Tpr3g1625 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 348 614 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g1625 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 637 881 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g1625 948 Gene3D - 601 733 IPR023299 GO:0000166
Tpr3g1625 948 Pfam E1-E2 ATPase 374 570 - -
Tpr3g1625 948 ProSiteProfiles Heavy-metal-associated domain profile. 141 215 IPR006121 GO:0046872
Tpr3g1625 948 Coils Coil 224 244 - -
Tpr3g1625 948 CDD P-type_ATPase_Cu-like 243 913 - -
Tpr3g1625 948 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 310 911 IPR027256 GO:0006812|GO:0016021|GO:0019829
Tpr3g1625 948 Pfam Heavy-metal-associated domain 144 211 IPR006121 GO:0046872
Tpr3g1625 948 CDD HMA 144 200 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1625 Tpr-Chr3 14469023 14481632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1625 301 912 Primary Pumps ATPases AT1G63440 39.524 7.50e-123 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1625 K17686 - gmx:100796210 1427.54