Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1614 ATGAATGCTTCATCTTTAACCTCAAGCCTAAGTATTTCTAATTCAAAGCAACTTCCACAACTCTCAAGTAAACAACAAAGATCTTGTCAAGTGCACTTTAAAACAATTTCATGTAGAGCAACAAAGCTAGTTGAAGAAACCAAGAATGGATCAAATTTCTACAAAATGTTATCGGTGAATCCGAAAAACGCAACAATGGATGAGATAAAGAGATCTTATAGATCAATGGCACTTCAATATCATCCAGATGTATGTCACGATCCTTCAATGAAAGAGGAATCAACGAAAATATTTGTTCGATTAAATGCGGCTTATGAAACTTTGTCGAATCCTATGCTTCGTGAACAATATGATAGTGAATTGGGATTGAAAAACAATATGATGAATATGAATAATATTGTTAATCAAGAGATTTGGAGAAGTAGGTGGCAAGAACAAGTGGTTGAGTTGAAGAAAAGATCTTCAAAACGTATGGGACAAAAAGGAAGTAGAATGAGGACACAAGAAAGATAG 513 0.3392 MNASSLTSSLSISNSKQLPQLSSKQQRSCQVHFKTISCRATKLVEETKNGSNFYKMLSVNPKNATMDEIKRSYRSMALQYHPDVCHDPSMKEESTKIFVRLNAAYETLSNPMLREQYDSELGLKNNMMNMNNIVNQEIWRSRWQEQVVELKKRSSKRMGQKGSRMRTQER* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1614 170 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g1614 170 Gene3D DnaJ domain 38 146 IPR036869 -
Tpr3g1614 170 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
Tpr3g1614 170 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 4 169 - -
Tpr3g1614 170 SMART dnaj_3 51 113 IPR001623 -
Tpr3g1614 170 PRINTS DnaJ domain signature 55 73 IPR001623 -
Tpr3g1614 170 PRINTS DnaJ domain signature 73 88 IPR001623 -
Tpr3g1614 170 PRINTS DnaJ domain signature 93 113 IPR001623 -
Tpr3g1614 170 MobiDBLite consensus disorder prediction 150 170 - -
Tpr3g1614 170 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 4 169 - -
Tpr3g1614 170 Pfam DnaJ domain 52 118 IPR001623 -
Tpr3g1614 170 CDD DnaJ 52 110 IPR001623 -
Tpr3g1614 170 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Tpr3g1614 170 SUPERFAMILY Chaperone J-domain 11 117 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1614 Tpr-Chr3 14389521 14390303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1614 54 119 C2H2 Transcription Factor Family AT1G74250 44.118 7.22e-08 49.3