Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1604 ATGGGAGATCATAACAACAATGTTAATCTTCCACCCGGTTTTCGATTTTATCCAACTGATGAAGAACTTGTCGTCCATTTCCTTCATAGAAAGGCTTCCCTTTTACCTTGTCATCCAGATGTTATTCCTGATCTTGACCTCTATCCTTTTGATCCATGGCAACTTCAAGGAAGAGCTTTGGAAGAGGGAAATCAATGGTACTATTATAGTAGAAGGACACAAAATAGAATGACTAATAATGGTTATTGGATGCCAATGGGAATGGAAGAACAAGTTTTAACAAGCTCAAGTAATAAGAGAGTTGGTATGAAGAAATATTATGTTTTCCATATTGGTGAAGCACCTGATGGTAACAAAACTAATTGGATAATGCAAGAGTATCGTCTTTCCGATTCCGCTTCTTCCTCTACTAGATCATCTTCATCCAAAAGAAAATCAAAATCAGAACATAGTAGGTGGGTGATATGTCGAGTTTATGAACACGATGAAGATGATGATGATCAGGATGGAGATGGAACAGAGTTGTCTTGTTTGGATGAAGTTTTCTTGTCATTGGAAGATCTTGATGAAGTAAGCTTGCCAAATTAG 588 0.3707 MGDHNNNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDLYPFDPWQLQGRALEEGNQWYYYSRRTQNRMTNNGYWMPMGMEEQVLTSSSNKRVGMKKYYVFHIGEAPDGNKTNWIMQEYRLSDSASSSTRSSSSKRKSKSEHSRWVICRVYEHDEDDDDQDGDGTELSCLDEVFLSLEDLDEVSLPN* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1604 195 Pfam No apical meristem (NAM) protein 11 129 IPR003441 GO:0003677|GO:0006355
Tpr3g1604 195 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 7 192 - -
Tpr3g1604 195 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Tpr3g1604 195 PANTHER NAC TRANSCRIPTION FACTOR 56 7 192 - -
Tpr3g1604 195 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Tpr3g1604 195 ProSiteProfiles NAC domain profile. 10 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1604 Tpr-Chr3 14274868 14276278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1604 9 160 NAC Transcription Factor Family AT1G69490 43.750 2.69e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g1604 NAM 4.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1604 - - gmx:100788893 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1604 3 14274868 14276278 Tpr2g2644 2 31261448 31263134 PCT