Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1596 ATGAGTTCTCCACAAGCTCTTAATATCATATTCCAATTTCCCCTCTTTGTTCAATTTCAACACTTATCTTTATTGTACCTTAATTTGTCCTTCAATATGGCCTCCCAAATTGGAGCAAAAACTAATGGAATTTCACCAAACAATTTTCAAATTGAGATTCCAATACATACCAAAAGTGTTGAAAAAGAAAGCAACATTGACTACTTTCAAAGGGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGATTAATCACTGTTGCCTCATTGATGATTGGTGTTGGAGCTATAAAAGAAGATATCAGTGTAATGCTCCTTGCTGGTTTCGCCGGTTTAGTAGCCGGTGCTTGTAGCATGGCTATTGGTGAATTTGTGTCTGTTTATACTCAATATGACATTGAGATAGCTCAAATTAAAAGAGAAAGAGAATTAGCAAATAATAATAATGATGAAGATGAAAGTAGTGAAAGGGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCACTAATGCCATTGTTAGCAGCTGCATTTATAAAGAATCATAAGATTAGAATGGGTGTTGTTGCTGCTGTGGTGAGTTTTGCATTGTTGGTGTTTGGTTCAGTAGGAGCATTGATTGGAAAAACTCCAGTTATGAGGTCTTGTGTTAGAGTGCTTATTGGAGGTTGGATGGCTATGGCTATTACTTTTGGTTTCACCAAATTGATTGGCACCACTGGACTTTGA 762 0.3753 MSSPQALNIIFQFPLFVQFQHLSLLYLNLSFNMASQIGAKTNGISPNNFQIEIPIHTKSVEKESNIDYFQRAQWLRAAMLGANDGLITVASLMIGVGAIKEDISVMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQIKRERELANNNNDEDESSEREKLPNPFQAALASALAFSVGALMPLLAAAFIKNHKIRMGVVAAVVSFALLVFGSVGALIGKTPVMRSCVRVLIGGWMAMAITFGFTKLIGTTGL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1596 253 Pfam VIT family 157 245 IPR008217 GO:0005384|GO:0030026
Tpr3g1596 253 Pfam VIT family 75 155 IPR008217 GO:0005384|GO:0030026
Tpr3g1596 253 Coils Coil 130 157 - -
Tpr3g1596 253 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 33 250 IPR008217 GO:0005384|GO:0030026
Tpr3g1596 253 CDD Nodulin-21 73 222 - -
Tpr3g1596 253 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 33 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1596 Tpr-Chr3 14226000 14226821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1596 61 253 Nodulin-like Gene Family AT3G43660 63.731 1.06e-91 267