Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1594 ATGGCTTCCCAACTTGGAGCAAGAACCAATGGAATTTCACCAAACAATTTTCAGATTGAGATTCCTATCCATGCAAATAGTACTACTATAATAGATAAAAAACAGAACCAAAGTGTTGATGAAAATGAGAGTAACAACATTGATTACTCTCAAAGGGCACAATGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGCTTAATCACTGTTGCCTCATTGATGATTGGTATTGGAGCTATAAAAGAAGACATAAGTGTAATGATCCTTGCTGGTTTCGCCGGTTTAGTAGCCGGTGCTTGTAGCATGGCTATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATGGCTCAAATTAAAAGAGAAAGAGAATTAGCAAATAATAATAATAATGATGAAGAAGAAAGTAGTGGAAATGAGAAATTGCCAAATCCATTTCAAGCAGCAATAGCATCAGCACTTGCATTTTCTGTTGGTGCTTTAATGCCATTGCTAGCAGCTGCATTTATAAAGAACCATAAGGTTAGAATGGGTGTAGTTGCTGCTGTGGTGAGCTTTGCATTGTTGGTGTTTGGATCAGTGGGAGCATTGATCGGAAAAACTCCGGTTATGAAGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTGTAACCAAATTGATTGGCACTACTGGAATTTGA 708 0.3814 MASQLGARTNGISPNNFQIEIPIHANSTTIIDKKQNQSVDENESNNIDYSQRAQWLRAAMLGANDGLITVASLMIGIGAIKEDISVMILAGFAGLVAGACSMAIGEFVSVYTQYDIEMAQIKRERELANNNNNDEEESSGNEKLPNPFQAAIASALAFSVGALMPLLAAAFIKNHKVRMGVVAAVVSFALLVFGSVGALIGKTPVMKSCVRVLIGGWMAMAITFGVTKLIGTTGI* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1594 235 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 232 IPR008217 GO:0005384|GO:0030026
Tpr3g1594 235 Coils Coil 111 138 - -
Tpr3g1594 235 Pfam VIT family 141 227 IPR008217 GO:0005384|GO:0030026
Tpr3g1594 235 Pfam VIT family 56 136 IPR008217 GO:0005384|GO:0030026
Tpr3g1594 235 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 232 - -
Tpr3g1594 235 CDD Nodulin-21 54 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1594 Tpr-Chr3 14210708 14211861 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1594 36 235 Nodulin-like Gene Family AT3G43660 63.000 1.31e-91 266