Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1592 ATGGTTGTTGGTACAATTTGTGATTCTGAGTCACTTAACCATGCAGTCACAATTCCAAATCCTACAAAGGAAATGGAAGAAAAACAAATTCAAATCACAAAAGAAAATAATAACAATACTAATATTGATTATTGGCAAAGAGCTCAATGGCTTCGCGCCGCTGTATTAGGAGCAAATGATGGATTAGTTTCCGTCGCTTCACTAATGATGGGAGTAGGAGCTGTAAAAACCGATAGCACGGCAATGTTAGTCGCGGGTTTTGCAGGATTAGTCGCAGGAGCATGTGGTATGGCGATAGGAGAATTTGTTTCGGTTTTCACTCAATATGAAGTCGAAGTTGGTCAAATGATGAGAGATTTAGGAACAAGTGATAGAAAAGAAAAGGAATTGGAAATTGAGTTGGAGAAAAGGAGATCATTGCCTAATCCATTACAAGCTGCTTTAGCTTCTGCATTCTCATTTTCTATAGGTGGTTTGGTTCCTTTACTAAGTGGTTCATTTATAAGTGATTATAAGATAAGGCTTATTGTGATTGTTTCAATAGCTAGTTTTGCTTTGGTTGTTTTTGGAAGAGTTGGTGCTATACTTGGTAAGACACCACAAATGAAATCTTCTATTAGGTTTCTACTTGGTGGATGGATGGCTATGGCAATCACTTTTGGGTTAACTAAATTACTTGCACATTCTAGTGGTTTGGAGTTTTGA 705 0.373 MVVGTICDSESLNHAVTIPNPTKEMEEKQIQITKENNNNTNIDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKTDSTAMLVAGFAGLVAGACGMAIGEFVSVFTQYEVEVGQMMRDLGTSDRKEKELEIELEKRRSLPNPLQAALASAFSFSIGGLVPLLSGSFISDYKIRLIVIVSIASFALVVFGRVGAILGKTPQMKSSIRFLLGGWMAMAITFGLTKLLAHSSGLEF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1592 234 CDD Nodulin-21 49 200 - -
Tpr3g1592 234 Pfam VIT family 126 223 IPR008217 GO:0005384|GO:0030026
Tpr3g1592 234 Pfam VIT family 51 122 IPR008217 GO:0005384|GO:0030026
Tpr3g1592 234 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 2 227 IPR008217 GO:0005384|GO:0030026
Tpr3g1592 234 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 2 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1592 Tpr-Chr3 14207998 14209043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1592 24 232 Nodulin-like Gene Family AT3G43660 56.459 2.72e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1592 K22736 - gmx:100810586 272.322