Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1590 ATGGAAAGTATGTGGGATAGGTTGAAGCCAGCCTTGCTAATGATTGGGGTGCAAATAGTATTTTCTGCTTGCAATATTCTTTACAAGTTTGCCATATTTGATGGAATGAGTACCATTGTCATTGCAGCTTATCGCTTAGCCTTTGCAGCTGTTACCACTATTCCTCTTGCTCTTATTTTTGAAAGGAAGAGGCCGAAGATGACTTGGAGGGTGTTTAACCTTTCACTTCTAAGTGGATTATTTGCTGGAGTTTTATTTCAAAACCTATTCTATGGAGCTTTGGTTTTGGCACCAGCAACTCTTGTATCAGCTATCTACAACCTTGTTCCCTCCATCACCTTTGTCTTGGCTGTATCCTTCGGTTTAGAGAAGTTAAATTGGGGAGCAGCAACAGGAAAGGCAAAGGTTGCAGGAACTATACTTGGACTTGCTGGTGCATTATTGTTGATATTTTACAAAGGAGTTGAATTTGATATTTGGCCTTTTGCAATCAATCTTTTGGATCCAAACAAAAGCCAAACAGGACATGTCACTGATACTACCACTGAATTGTTAGGTGTTATCTGTGTTATACTTAGTTGCTTCTGTTTCTCAATTTGGCTCATCATTCAGGCTAAGATTACCGAAGTATATCCATGCCCTCAATCAAGCATAGCTTTGATGTCTATAATAGGAACAATACAATGTGTTATTTTAGGTTTCATTGTTGAGAGGGATTTGAATGAATGGAAGCTTGGTTGGGATGTCAGGCTCTTCACTGTCGCTTTTTCGGGTATTTTGGCGTCCGGAGTAATGATTCTTGTCATGGCATGGGTCGTACAGATGAAAGGGCCTTTATATGCGTCCGCTTTCAACCCTCTAATGCTTTTGTTTGTAGCTATTGTCGCATCTATGCTTCTGGATGAGAAGTTAAACTTAGGAAGTATACTCGGAGGAGCGTTGATTGTGTGTGGCCTATACACTGTACTATGGGGTAAAGGTGGAGAAATACAAAAGAAGATTGAATTAGAGCCAACACAATTTGGTGATTTCGAAGCTACGAGGCCATTGTTGAGTCCATGA 1062 0.403 MESMWDRLKPALLMIGVQIVFSACNILYKFAIFDGMSTIVIAAYRLAFAAVTTIPLALIFERKRPKMTWRVFNLSLLSGLFAGVLFQNLFYGALVLAPATLVSAIYNLVPSITFVLAVSFGLEKLNWGAATGKAKVAGTILGLAGALLLIFYKGVEFDIWPFAINLLDPNKSQTGHVTDTTTELLGVICVILSCFCFSIWLIIQAKITEVYPCPQSSIALMSIIGTIQCVILGFIVERDLNEWKLGWDVRLFTVAFSGILASGVMILVMAWVVQMKGPLYASAFNPLMLLFVAIVASMLLDEKLNLGSILGGALIVCGLYTVLWGKGGEIQKKIELEPTQFGDFEATRPLLSP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1590 353 PANTHER WAT1-RELATED PROTEIN 11 342 - -
Tpr3g1590 353 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Tpr3g1590 353 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Tpr3g1590 353 PANTHER WAT1-RELATED PROTEIN 11 342 IPR030184 GO:0016021|GO:0022857
Tpr3g1590 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Tpr3g1590 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Tpr3g1590 353 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1590 Tpr-Chr3 14195180 14199727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1590 3 332 Nodulin-like Gene Family AT1G68170 39.879 3.16e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1590 - - mtr:MTR_4g094340 577.4