Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1588 ATGAAGGGGATATACAATTCTTTGGAAGGACTAAAACCAATCGTACTAATGGTGTTTGTGCAGATTGCATATGCTGCTGTGAATATCATATACAAGCTCGTCATAAATGATGGAATGAGCATGAGGGTGGCTACCGCTTATCGTCTCACTTTAGCGTCGGCTTTCACCATTCCTCTTGCTCTTATCTTTGATAGGAAGAAGAGACAAAAAATTACTTGGAAGGTTCTTTTTCTGGCATTTTTATGTGGATTGTTTGGGGGAAGTTTATTTCTAAATCTTTATAGTGTTGGCTTAGCTTTGACTTCAGCAACTTTTATGTTGTGCATATCCAACCTTGTTCCTGGAATAACCTTCATCATGGCCATATCCTCCAGATTGGAAAAGCTAAATTGGGGAGTAGTAGAGGGAAAAGTCAAGGTAATAGGAACACTTATTGGCATTGTTGGGGCAATGGTGGTGATATTTTACAAAGGAGTGGAAATTAATATTTGGTCTTCCAATATCAATCTTATGCATCAACATCATAACCAAAATGGGCTTCTTGAACCAAAACATAAGGATTTTAGTAATAAAATATTGGGTGTTCCATGTGCTATAGCAAGCATTTGCTCTTTTTCTTTGTGGTTAATCGTTCAGGCTAAGTTGAATGAAGAATATCCATGCCATCATTCATGCTCAGCATTGATGTGCACAATGGGAGCAATTCAGGCCATTGTTGTTGCTCTTTGTATCGATAGGGATTGGACTGAATGGAAGCTCGGTTACGATATTCGTCTTTTTACCGTGGCTTTTTCGGGAATTGTACCCTCCGGATTAGTGATTATTGCTATTGCTTGGTGCATAAAGATGAGAGGTCCTTTATTTGCAGCTGTTTTCAATCCTCTTCAGCTTTTACTTGTAGCTATCTTTGCTTATTTATTGGTGGATGAGAAGTTATATTTAGGAAGTGTTCTTGGAGCAGTGTTGATCGTGTGTGGCCTATATGCGGTGCTTTGGAGTAAAAGCAAAGAAATGGAAAAAAAGACACAATTATTATCATTAGAAACTAACATTGAGCTTGAAGCAGAGGAACTTGTTGTGCCCAATCCTGAAAAGTGTATCCAAAGCAACAAGACTGAAAACAATATTATTGAGATTAATGTTCCAAATGTTAAAATTGAGTCTTTGGATTCATGTTATGATAATAGTACACACCACCAAGTTGGTTTGTAA 1212 0.3754 MKGIYNSLEGLKPIVLMVFVQIAYAAVNIIYKLVINDGMSMRVATAYRLTLASAFTIPLALIFDRKKRQKITWKVLFLAFLCGLFGGSLFLNLYSVGLALTSATFMLCISNLVPGITFIMAISSRLEKLNWGVVEGKVKVIGTLIGIVGAMVVIFYKGVEINIWSSNINLMHQHHNQNGLLEPKHKDFSNKILGVPCAIASICSFSLWLIVQAKLNEEYPCHHSCSALMCTMGAIQAIVVALCIDRDWTEWKLGYDIRLFTVAFSGIVPSGLVIIAIAWCIKMRGPLFAAVFNPLQLLLVAIFAYLLVDEKLYLGSVLGAVLIVCGLYAVLWSKSKEMEKKTQLLSLETNIELEAEELVVPNPEKCIQSNKTENNIIEINVPNVKIESLDSCYDNSTHHQVGL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1588 403 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Tpr3g1588 403 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Tpr3g1588 403 PANTHER WAT1-RELATED PROTEIN 8 355 IPR030184 GO:0016021|GO:0022857
Tpr3g1588 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Tpr3g1588 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Tpr3g1588 403 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 8 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1588 Tpr-Chr3 14161030 14164156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1588 11 350 Nodulin-like Gene Family AT1G25270 42.815 5.65e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1588 - - cam:101515687 556.214