Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1582 ATGGCGTCGTCGAAGGTTGTTGTTGTTTCAACAAATCCGGATCTGCCACGCGCCCCTTCTATATCTTCTTCTTCTTCTTCTTCTTCCATCATTTCTTCTTTTCTTCTTCCCTCTCATTTTCATCATCTACCTCCAAAAAACACCATCACCATGGACGAAATTCTCAAAAACATTTACCCTGCTGCAATAGAAGCTGCTTCCAAACAACAACAACAATCCACCTCCACCGCCGCCACCACCACCAACAACAACATTGACGATGTCTGGAGGGACATCTTCAACGCCGGTGGTGGCACAAACCATCATGATCATAAATATCAATATCAATATCATCCTTCTTCTGATGAAGGTTTCTCTACCTACAGTCCAGGTGGTGATGAAGTTACTCTTGAAGATTTCTTGGTGAGAGCTGGTGCTGTTCCTGGTCCTGCTCCTTTCTCTCCTCATCAATATCCTTCTTCTTCTGACGCTTCACATTCTCTTCAAGTTTCAACTGTTAAACGTAAGGCTGTTGAGGAAACACTTGAACTTGATAAAGCTGCTCTTCAGAAACAGAAAAGAATGATCAAGAATCGTGAGTCAGCCGCTAGGTCCAGAGAACGCAAACAGGCTTATACTACTGAGCTTGAGAGCCAAGTTAAGCGTCTGGAGATAGAGAATAAGCAATTATTAGAAGAAAAGGCAGAGATGAAAAATCGGAGGATCAAAATGCTTAAAGAGTTTGTGATTCCAGTTACGGTGCAGCGTAGACCAAAACAGAAACTGCGGAGATTGAATTCATCTTAA 786 0.4262 MASSKVVVVSTNPDLPRAPSISSSSSSSSIISSFLLPSHFHHLPPKNTITMDEILKNIYPAAIEAASKQQQQSTSTAATTTNNNIDDVWRDIFNAGGGTNHHDHKYQYQYHPSSDEGFSTYSPGGDEVTLEDFLVRAGAVPGPAPFSPHQYPSSSDASHSLQVSTVKRKAVEETLELDKAALQKQKRMIKNRESAARSRERKQAYTTELESQVKRLEIENKQLLEEKAEMKNRRIKMLKEFVIPVTVQRRPKQKLRRLNSS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1582 261 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 8 260 IPR043452 GO:0003700|GO:0045893
Tpr3g1582 261 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Tpr3g1582 261 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 233 IPR004827 GO:0003700|GO:0006355
Tpr3g1582 261 Gene3D - 182 236 - -
Tpr3g1582 261 Coils Coil 206 240 - -
Tpr3g1582 261 Coils Coil 172 192 - -
Tpr3g1582 261 Pfam bZIP transcription factor 180 240 IPR004827 GO:0003700|GO:0006355
Tpr3g1582 261 SMART brlzneu 179 243 IPR004827 GO:0003700|GO:0006355
Tpr3g1582 261 PRINTS cAMP response element binding (CREB) protein signature 178 194 - -
Tpr3g1582 261 PRINTS cAMP response element binding (CREB) protein signature 196 216 - -
Tpr3g1582 261 PRINTS cAMP response element binding (CREB) protein signature 216 233 - -
Tpr3g1582 261 PANTHER OS05G0437700 PROTEIN 8 260 - -
Tpr3g1582 261 SUPERFAMILY Leucine zipper domain 183 237 IPR046347 GO:0003700|GO:0006355
Tpr3g1582 261 CDD bZIP_plant_BZIP46 183 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1582 Tpr-Chr3 14111605 14114039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1582 45 223 bZIP Transcription Factor Family AT2G41070 34.101 4.75e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g1582 bZIP_1 3.8e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1582 K14432 - gmx:100101890 151.754