Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1577 ATGGGGAGAGAAGAAGAATCCAAAAATATGGAAATTAATCTCTCTTTGAAGATAGATAGTGATGATGATGAGCAAGGAGAAGAAGTAGAAGATCATGATCAAGTGAAAGAGGATGATGAGAAGGAAGAAGTTCATGAAGCTACAGCTGGTGAAATTGAAGATGATTCATCGGTGATTCAACTTTCTTTGCAAGATAACACAAAAACAAAAGAGTTAAGTGCCTTAGAAATGGAGATGGAGAGTATGAAAGAAGAAAACAAAGTTTTAAGGAAAGTGGTGGAACAAACAATGAAAGACTACTATGATCTACAAACCAAATTTTCAGTCATCCAAGAAAATAATATTAAAAGAAAGGATCATACACTTTCTCTCTCACTACAAGACAATAATGCAACAAGTGGTGAAGGACCATCAAGATTAATTCATGAAATCTTTAGTGAAAAATTTGAAAGAACTCCTTCTCCATTACCACTAAACAATATTGATCATGATAGTATTAGTGATAGTGATTTGGGTTTATCACTAAGGTTGCAAACAAGAACATGTGAGAAAGATATTGAAGAAAATAAAGAAGCTGGCAAAAGAGAACAATTGGCAAGTTTTGAAACAGTGCAGAATAAATTTCAAAGAGTACATGAGTTGCCAGCTGGTATTACTACTCATGCAGCTGCTTATACCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAATGAATGACGGATGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAATCCATGTCCACGAGCTTATTATCGTTGCACCGTAGCTACAGGTTGTCCCGTTAGAAAACAGGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACCTATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCTATGGCATCAACAGCATCAGCAGCAACATCATTTATGTTACTAGATTCAAGCAATCCTAATTCGGATTATGGTTACACAACTCAACAAACCTTTAATAATCCTTACATTAATAATACCTTCCACCACCCATTAAACCAATCTTCAAATATTAGAAACATAAACCCTAATGATCCATCACAAGGCATTGTTCTTGACCTCACCAATAACAATAATCTCCACGAACCGCGACGTTTTTCGACTGCAGGTAGCTCTAGCTCAACTTCAACTGATCAACATCAGTTTTCTTGGATGCAAAACAAATACAATCAACAAAGTAGTACTAGTAGTAGTGCTAATATTGCAATGAACAGTTTTTACAAACCATTGGAAATTCATGATAGGAGTTGGAAACGTGATCAAGAAAGTAACAACAATAACAACAATGTGACTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGAAAGCAACAACACTACTACTAATGGTAGCAACAATTGA 1467 0.3586 MGREEESKNMEINLSLKIDSDDDEQGEEVEDHDQVKEDDEKEEVHEATAGEIEDDSSVIQLSLQDNTKTKELSALEMEMESMKEENKVLRKVVEQTMKDYYDLQTKFSVIQENNIKRKDHTLSLSLQDNNATSGEGPSRLIHEIFSEKFERTPSPLPLNNIDHDSISDSDLGLSLRLQTRTCEKDIEENKEAGKREQLASFETVQNKFQRVHELPAGITTHAAAYTPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVATGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAATSFMLLDSSNPNSDYGYTTQQTFNNPYINNTFHHPLNQSSNIRNINPNDPSQGIVLDLTNNNNLHEPRRFSTAGSSSSTSTDQHQFSWMQNKYNQQSSTSSSANIAMNSFYKPLEIHDRSWKRDQESNNNNNNVTAIASDPKFRLAVAAAISSLMNKESNNTTTNGSNN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1577 488 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g1577 488 Coils Coil 65 99 - -
Tpr3g1577 488 MobiDBLite consensus disorder prediction 1 53 - -
Tpr3g1577 488 MobiDBLite consensus disorder prediction 21 37 - -
Tpr3g1577 488 MobiDBLite consensus disorder prediction 38 52 - -
Tpr3g1577 488 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 484 IPR044810 GO:0003700
Tpr3g1577 488 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 11 484 - -
Tpr3g1577 488 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g1577 488 Pfam WRKY DNA -binding domain 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g1577 488 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g1577 488 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g1577 488 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1577 Tpr-Chr3 14069153 14072176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1577 27 372 WRKY Transcription Factor Family AT1G68150 46.779 4.04e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g1577 WRKY 3.1e-24 CL0274