Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1575 ATGGAGTGGATGCGAAAGACCAAGACCAAAAAACCGCCACGATTGGAGCGATTGAACGCCAAAAAAAACATCAATTACCAACCCACCACCGTCGCCGCCGCCGTTACTTCTCCATCTCCAATTCCATCTTCCTCCGACGAAGAAACCAGTCTCCGTGTATTAGGCATCGATGGCGAATTCGATCGAATTTTTCAAAGTTTGGGTCTTTCTGGACCTGAAGATTTTGCTATCCCAACTCAAGATTGGGAAGCTAGAAAGGTTCGCTCTGTTTCTACAATTTCGGTTGCTGATGATGTTGCTGTTGTTGCTGTTAGAGATTCTCCTTCTTCTTCGGGTGAACATGGTGTTAGGGTTGTTGTTGATCCACTCATAAATGGTGAAAGGAGTGTGCTTTTTACTGATTCTGGTTCTTTTACTACTTCTCATGATTATGATAGTGATGGTGTTGCTGAGAGGAATTTGTTTCCTCCTTCTGGATGGATTAAACCCACTTTTTCTTCTTGGCAAAAAGGTGCCATTTTGGGAAAGGGTTCTTTTGGAACTGTTTATGAATGCTTCACTGACGATGGATTCTTTTTTGCGGTCAAGGAGGTGTCTTTGCTGGATGATGGTAGCCAGGGAAAGCAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTCGGTTTCAACATGATAACATAGTTCGATATTATGGCTCAGACAAGACTGAAAGCACACTGTATATATTCCTCGAGCTTGTGTCAAAAGGGTCGTTGGCCAGTCTTTATCAAAGCTATCACCTAAATGATTCTCAAGTTTCTGCATACACAAGACAAATTTTAAATGGCTTGAAGTATCTTCATGAACGTGATGTGGTCCATAGGGATATCAAGTGTGCCAATATACTGGTTGATGTAAATGGGTCGGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACAAAGTTGAATGATGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAGGAACCAAGGTTACGGGCTAGCAGCTGATATATGGAGCTTAGGGTGTACGGTTTTAGAGATGCTGACAAGGAAGCCACCTTACTTTGATTTGGAAGGAATGCAAGCAATATTTCGGATTGGCAGGGGTGAACCCCCACCCATTCCTGAATATCTATCTAAAGATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAGTAAACGCCCAACTGCAGCTCAGCTATCGGATCATCCATTTCTAAGGAGACGATCAAGTTCAGGTTCTCCACGTATTAATATTATTATTCGGCCTTAA 1317 0.4252 MEWMRKTKTKKPPRLERLNAKKNINYQPTTVAAAVTSPSPIPSSSDEETSLRVLGIDGEFDRIFQSLGLSGPEDFAIPTQDWEARKVRSVSTISVADDVAVVAVRDSPSSSGEHGVRVVVDPLINGERSVLFTDSGSFTTSHDYDSDGVAERNLFPPSGWIKPTFSSWQKGAILGKGSFGTVYECFTDDGFFFAVKEVSLLDDGSQGKQSIFQLQQEISLLSRFQHDNIVRYYGSDKTESTLYIFLELVSKGSLASLYQSYHLNDSQVSAYTRQILNGLKYLHERDVVHRDIKCANILVDVNGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNQGYGLAADIWSLGCTVLEMLTRKPPYFDLEGMQAIFRIGRGEPPPIPEYLSKDARDFILKCLQVNPSKRPTAAQLSDHPFLRRRSSSGSPRINIIIRP* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1575 438 SMART serkin_6 168 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1575 438 ProSitePatterns Protein kinases ATP-binding region signature. 174 196 IPR017441 GO:0005524
Tpr3g1575 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Tpr3g1575 438 Pfam Protein kinase domain 169 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1575 438 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 425 - -
Tpr3g1575 438 ProSiteProfiles Protein kinase domain profile. 168 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1575 438 PRINTS Tyrosine kinase catalytic domain signature 246 259 IPR001245 GO:0004672|GO:0006468
Tpr3g1575 438 PRINTS Tyrosine kinase catalytic domain signature 281 299 IPR001245 GO:0004672|GO:0006468
Tpr3g1575 438 PRINTS Tyrosine kinase catalytic domain signature 347 369 IPR001245 GO:0004672|GO:0006468
Tpr3g1575 438 PRINTS Tyrosine kinase catalytic domain signature 390 412 IPR001245 GO:0004672|GO:0006468
Tpr3g1575 438 SUPERFAMILY Protein kinase-like (PK-like) 155 425 IPR011009 -
Tpr3g1575 438 MobiDBLite consensus disorder prediction 1 23 - -
Tpr3g1575 438 MobiDBLite consensus disorder prediction 1 18 - -
Tpr3g1575 438 PANTHER BNAA02G34600D PROTEIN 4 425 - -
Tpr3g1575 438 Gene3D Transferase(Phosphotransferase) domain 1 166 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1575 Tpr-Chr3 14039210 14044647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1575 14 93 MAP Kinase Kinase Kinase AT4G08500 42.045 1.35e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr3g1575 Pkinase 1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1575 - K13414 gmx:100820552 592.423