Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1563 ATGGCTACCATCATTTCACCAACTTGCTTCATCTTTATTCCTATGATGATAATTTTATCATCATTATGTCCCATAACAACATTATGTGCAACAGTCCTAGAAGACCTTAAAAACTTACACAAACCACAAGATTTCAACACTACAATTTTCAACAACTGTCTCAAAAACCCATCTCTCAGATACTGCAATTCATCTCCTATGATAGACCTTGATGAAATATTCAAATACACTATTGTTGCTAGCCATCTTTGCAATGAATCCAACAATCCCAATTGTGTTGAATCCTTCCCGAAAATCGATCTTCGAAACCGACCAAACATTGCATCTCTTTACTTGTCTTTCACTTTCTTTTGGAAATATTGTCCATTGACTATTCTGTCTATTGATTTCTCTAACAATTCTGTGAAGGGTAGTTTTCCAAATGATGTTCTTTATTGCACTCAAATTCAGTCTCTTGATTTAAGTCTCAATGAATTTTCTGGTGAAATTCCTATTGAAAGTTTCTCTCCATTAACTAATCTCACTTTTCTTAACCTCTCTTATAACTGTTTTTCTGAGAGTGAAGTTCCTGATTCACAATTCTTCAAAAAGTTTAATTCTTCTAGTTTTCTTCATTCTGGTGCTCTCATTGATCATAAAAAGTTCACTATAAAAGCTATCATTTTATTGGTTGGTTTTCCTATTCTTGTTATTTTGATGGTAATTTTCTTGGCATGGATTTGTTTTCAAAGGCCTGATTTTCTTCCAAGAATATTTCATAGTAGGTCTAAATTTACGCCGGCGATTCTAAAGGCGGCAACTTACAGTTTTTCGAAGGAAAATTTGGTTGGTAAGAGTGATATTGTTCACATCTATAAAGGGGTGTTAAGAGATGGAACTGAAGTGAAAATTGAGATGTATTGGGATGATATATCAAGGGATAGTTATCATAAATTTGTTGAGGAATGTCAGATATTGTCTGAGTTAGACCACAAGAATCTTGTTAAGTTTTTAGGGTGGTGTAAAGGTAGAAAATTTAGGGCTATTATAACAGAATGGACAAAAGATGAAAATGTTGAAATGTGGCTATTAAGGGAAGCACCATCATGGAATCATAGAGTGAAAGTTTTGATGGGAGTTGTTGAATGTATGTTATATTTGCATGATGAATGGCCTGAAGTTGATTATGATCTTAAGACAAGTAGTGTTTTGTTATCTGATAATCATGAACCATTGATTTCTAGGTTTCAAGTTGGAGACAGAAACAACAGTAGAAAAAAGATATGCAAGTTTGGAGTATTTTTGCTAGAGATGATACTAAACAAGAGTATTAAAGAGGAGTTTGATGGAAATGATGCTGGATTTCTTAGCTACATGAGAACCCTTCATCATGCAGAATTACAACATATGATTGATGAGAGAATGGATTTAAATGAAACAACTTTGCATCAAGTTAAACAAGCTTTATCCCTTGGATTAATGTGCATAGACCAATCAAACAATGAGCATCCAAGCTTGGCACAAATATTCAATATTGTATCAAAGGCATATAAGGCTAACCTTGTTAAGGGACACAAACGAGTTCAGTTCAGATAA 1575 0.3359 MATIISPTCFIFIPMMIILSSLCPITTLCATVLEDLKNLHKPQDFNTTIFNNCLKNPSLRYCNSSPMIDLDEIFKYTIVASHLCNESNNPNCVESFPKIDLRNRPNIASLYLSFTFFWKYCPLTILSIDFSNNSVKGSFPNDVLYCTQIQSLDLSLNEFSGEIPIESFSPLTNLTFLNLSYNCFSESEVPDSQFFKKFNSSSFLHSGALIDHKKFTIKAIILLVGFPILVILMVIFLAWICFQRPDFLPRIFHSRSKFTPAILKAATYSFSKENLVGKSDIVHIYKGVLRDGTEVKIEMYWDDISRDSYHKFVEECQILSELDHKNLVKFLGWCKGRKFRAIITEWTKDENVEMWLLREAPSWNHRVKVLMGVVECMLYLHDEWPEVDYDLKTSSVLLSDNHEPLISRFQVGDRNNSRKKICKFGVFLLEMILNKSIKEEFDGNDAGFLSYMRTLHHAELQHMIDERMDLNETTLHQVKQALSLGLMCIDQSNNEHPSLAQIFNIVSKAYKANLVKGHKRVQFR* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1563 524 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 516 - -
Tpr3g1563 524 SUPERFAMILY Protein kinase-like (PK-like) 248 506 IPR011009 -
Tpr3g1563 524 Gene3D Phosphorylase Kinase; domain 1 252 346 - -
Tpr3g1563 524 Gene3D Transferase(Phosphotransferase) domain 1 356 521 - -
Tpr3g1563 524 ProSiteProfiles Protein kinase domain profile. 270 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1563 524 Pfam Protein tyrosine and serine/threonine kinase 274 425 IPR001245 GO:0004672|GO:0006468
Tpr3g1563 524 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 516 - -
Tpr3g1563 524 SUPERFAMILY L domain-like 85 193 - -
Tpr3g1563 524 Gene3D Ribonuclease Inhibitor 47 214 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1563 Tpr-Chr3 13978652 13981001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1563 127 506 Receptor kinase-like Gene Family AT5G45780 22.768 6.86e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g1563 PK_Tyr_Ser-Thr 3.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1563 - - gmx:100779045 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1563 3 13978652 13981001 Tpr3g1563 3 13978652 13981001 ECH