Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1546 ATGTCTTCAACAGTTTCAGGTTTGTTAACAAACATGTTAGACAGATTACTAACAACAGCTTTTCACAACATTTCAATGGCAAAAGGTCTTCACAATGATGTAACAAATCTTCAAAACACTCTCACAATCATCAATGCTTTCATTCTTGATGCTGAAAACAAACAAACACAAAGTAACTCTATTTCTCTTTGGCTTCACCAACTCAAATATACTTTATTTGATGCTAGTGATATTCTTGATGAGATTGAATGTGAATCTTTGAGGAATCAAGTTGTTAAAGCCAATGGAAACTTCAATACTAAGGTACAACGTTATTTATCATTTTCTAGTAACCCTTTTGCATTTCGTGTTAAGATGGCTAATAAGATTAAAGATATTAATCATAAGATAGATGAGATTTGTTCTCTTAGGATGAAATTGGGATTATCAGTATCAGAAAATCATGCTAGTGGAAGTGGAAATAGTAGTACTAGGCTTAGGAGAGAGACTCATTCTTATGTTAAGTCTTCTCATGTGATTGGTAGAGATGAAGAGAAAGAAAAGATTATTAGGTTTTTGATGGAACCACCATTAGGGAATGATGATGATGAGATTGATGTTATTCCAATTGTTGGGATTGGTGGGTTGGGAAAAACTACACTTGCTCAGTTAGTTTATAATGATGATAGGGTGATTGAGTTGTTCGAGTTGCGTATGTGGGTGTATGTTTCTGATGAGTTTGATGTTAAGAGGTTAGTTTCGGAGATTCTTAAAGCGATGCATGGAATGGAAGTAGATGCTCAGACGCATAGTTTTGATCAATTGCGAAATCTGCTTCGCGAAAGATTATGGGGGAAGAAGTTTTTACTTGTTTTAGATGATGTTTGGAATGAAGATTATAGAGAATGGCTTGAATTGAAAAAACTATTACTAGGGATGCAAGATGATGGAGATGATAAACTAGGTAGCAAGATTGTCACGACCACTCGAAGTGATAGGGTTGGTTCGATAATGGGGAATGCTTATAAACACAACTTGAAGTATCTCCCAGAAGAAGAGTGTATAAGGCTTTTTATTAAGTATGCATTTTTATCAGGAGAGGAGAAACGGTACCCGAGGCTTGTGGAAATTGGGAAGGACATTGCTAGGAAGTGTAAAGGGTTGCCCCTAGCAGTGGTAAGTTTAGGGTCCTTGCTTTACACTAGACTCGATGAAAGTGAGTGGAAGAAAATAAGAGATAGTCAAATTTGGAGAGTGAACCCTCGAGATGATGATGGCATTTTGGCTGCATTGAAATTAAGCTATAATCACTTGTCATCTGGATTGAAACAATGTTTCTCTTATTGTTCAATTTTTCCCAAGGGTTACGAGTATACTAATTTGGAGCTGATTTCTTTTTGGATGGCGCATGGATTACTGCAAACCAGAAATGAAGACGAGGAACCAGAAGATATCGGGGAGTTTTATATTCAGGAGCTAGTTTCAAGGTCTTTCTTTGAATGTGCCTCCGAAGAACAACTCGTTATAGACGGTCTTATTTCTGAAGAACTTGATCTTCTAGGCATCTCCTTTTTCAAAATGCACGATCTTGTTCACGACCTTGGTGTGTTCACAATGCAAAGTGAAAGGAAAGTAGTAAGCTTTAATTCAACAAATGTTCAAGAAAAAGTGCAGCATTTGTCATTCTCAGACAGTGGAGAAGGAGTTCCTGCCTTTGGTAAAACGTCGAGTAAGATTCGAACCATTGGATTCTGGCATGCGTTTCAAAAGGAACTTGCAATCACCGATCCGTTTGTTAAATGGATCTCCAACAAGTTCAAGTATCTCAGGGTGTTGAATATTCAAGGTTCTGATTTTCAGTTCTTACCGGACTGTTTCGACAAAATGAAGCATTTGAGGTATCTTGATCTAAGTTATTGCCGGAGGTTGGAAAAACTCCCAGATTCCATTTGCAAGCTTCAAAGCCTAGAGGTATTAAATCTCTGTAAATGTGTAGCACTTGCATATATTCCCCAAAAATTGAGGAATCTTGTCAGCCTTAGGATTTTGTGGATTACCATAACAATCACTGATTTATCTTTCATAGGCATTGGGAACTTGAAAAATCTACAAATTTTAATTTTGTGGAATTGTGATAATTTGGTCTCACTTCCACGCGATTTGAGGCACTTGACTTCTTTAAAGAGACTGACTATTGAGGCTTGTTATGAGGTGACTAGTTTTGAGGATGAAGAGGAAGAAGATGAAGAAGAAAATGAAAACTACCCTTTGAAACTTGAACGACTTTCGATTGACAAATTAACCAACTTGGCAGTATTACCTGGTTGGCTTAGAAGATGCGGTAAAACTTTGAGGTACCTTGGCCTTTCCGAGTGTTCGAGCCTAATGGCATTGCCAGAATGGTTGGTTAATCTGACATCACTTGAGACACTTCTAATTGCTGATTGTCGAAACTTGGCATTACCACAGCATATGGATCGTCTTCAAAACCTTCAGAATTTAAAGATATACGGATGTCCTAAGCTAATTGAGAGGTGCAAACAAAACACAGGCAGTGACTGGTACAAGATAGCTCATATCCCAAATGTTGAACTTGGCAGCGATTAG 2586 0.3759 MSSTVSGLLTNMLDRLLTTAFHNISMAKGLHNDVTNLQNTLTIINAFILDAENKQTQSNSISLWLHQLKYTLFDASDILDEIECESLRNQVVKANGNFNTKVQRYLSFSSNPFAFRVKMANKIKDINHKIDEICSLRMKLGLSVSENHASGSGNSSTRLRRETHSYVKSSHVIGRDEEKEKIIRFLMEPPLGNDDDEIDVIPIVGIGGLGKTTLAQLVYNDDRVIELFELRMWVYVSDEFDVKRLVSEILKAMHGMEVDAQTHSFDQLRNLLRERLWGKKFLLVLDDVWNEDYREWLELKKLLLGMQDDGDDKLGSKIVTTTRSDRVGSIMGNAYKHNLKYLPEEECIRLFIKYAFLSGEEKRYPRLVEIGKDIARKCKGLPLAVVSLGSLLYTRLDESEWKKIRDSQIWRVNPRDDDGILAALKLSYNHLSSGLKQCFSYCSIFPKGYEYTNLELISFWMAHGLLQTRNEDEEPEDIGEFYIQELVSRSFFECASEEQLVIDGLISEELDLLGISFFKMHDLVHDLGVFTMQSERKVVSFNSTNVQEKVQHLSFSDSGEGVPAFGKTSSKIRTIGFWHAFQKELAITDPFVKWISNKFKYLRVLNIQGSDFQFLPDCFDKMKHLRYLDLSYCRRLEKLPDSICKLQSLEVLNLCKCVALAYIPQKLRNLVSLRILWITITITDLSFIGIGNLKNLQILILWNCDNLVSLPRDLRHLTSLKRLTIEACYEVTSFEDEEEEDEEENENYPLKLERLSIDKLTNLAVLPGWLRRCGKTLRYLGLSECSSLMALPEWLVNLTSLETLLIADCRNLALPQHMDRLQNLQNLKIYGCPKLIERCKQNTGSDWYKIAHIPNVELGSD* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1546 861 Gene3D Ribonuclease Inhibitor 752 845 IPR032675 -
Tpr3g1546 861 CDD RX-CC_like 3 133 IPR038005 -
Tpr3g1546 861 Gene3D - 157 336 IPR027417 -
Tpr3g1546 861 PANTHER DISEASE RESISTANCE PROTEIN RP 30 839 IPR044974 GO:0006952
Tpr3g1546 861 Pfam NB-ARC domain 176 429 IPR002182 GO:0043531
Tpr3g1546 861 Pfam Rx N-terminal domain 9 96 IPR041118 -
Tpr3g1546 861 PRINTS Disease resistance protein signature 200 215 - -
Tpr3g1546 861 PRINTS Disease resistance protein signature 275 289 - -
Tpr3g1546 861 PRINTS Disease resistance protein signature 378 392 - -
Tpr3g1546 861 PRINTS Disease resistance protein signature 620 636 - -
Tpr3g1546 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 442 IPR027417 -
Tpr3g1546 861 Gene3D Ribonuclease Inhibitor 532 683 IPR032675 -
Tpr3g1546 861 SUPERFAMILY L domain-like 519 855 - -
Tpr3g1546 861 Gene3D - 422 529 IPR036388 -
Tpr3g1546 861 PANTHER OS05G0414200 PROTEIN 30 839 - -
Tpr3g1546 861 Gene3D - 9 133 - -
Tpr3g1546 861 Gene3D Ribonuclease Inhibitor 684 738 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1546 Tpr-Chr3 13876125 13880037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1546 197 835 WRKY Transcription Factor Family AT5G45050 22.721 1.52e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1546 - - cam:101500245 1397.1