Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1544 ATGAAGGCTCATTCTAACTTGCATAAAAGAAAGTCTACCTTGATTGCTGCTGATGGGAATCATGCTGTGTTTAAGAAGACAACAAGGAAGGGAAGCTTTGTAGACACTCTTGAACAAAAGCAGGCAGAAGATATCCTCACTAGAGAAAAAAAATACAATGAGGATGAGGATAACAACGACGCCGATGACAACAACACTGAAGAAAAAGCTGGAGATGATGATCAACAAGAGGAAGGAGAGTACTTACTAGGAGACGACGGTCCTACTACGGTTACAGAGGATGGAATTCACAAAGGTCTGTTCATGAAAGATACAGATGAAGAAAATAAAACTTCTACTCGACATTTCAGCCATGGATGTCACTTAATGGAAGGAGAGATGATCCATGGAATGGAGGACTATGTTTTTGCTAAACACATGAAGCTCAATGGTTACGACTTAGGACTCTACGCAATATTCGATGGACACGCAGGTCGTGATGTTGCAAAATATTTGCAAAGCCATCTATTTGAAAATATACTTAGTGAGCCCGATTTCTGGGAAAATCCAGTGCAAGCTGTTAAGAAAGCATGTAAAGCTACGGATGATGAGATTCTAGAAAACATAGCTGATTCACGCGGAGGATCAACGGCTGTGGCAGCAATACTAATTAATGGTGTAAAGTTACTGGTAATCAATGTTGGTGATTCTCGAGCAATATCGTGTAAAAATGGTCTCGCAAAACAACTTACCGTGGATCACGAACCGGAGAAGGAAAAGGATCTGGTTGAGAGCAGAGGAGGTTTTGTCATTAAGAGGCCCGGGGATGTTCCAAGAGTGGATGACCAGTTAGCAATGACACGAGCATTTGGAGATGGAAAACTGAAGGAGCACATCACTGCAGAACCAGATGTGATGATTAAGAAGATGGATGAGGACACTGAATTCATCATTTTGGCAAGTGACGGTCTTTGGAAGGTGATGACAAATCAAGAGGCTTGTGATTGTATCAAGGATGTTGATGATGCTCAAAAAGCAGCAAAAAAGTTAGTGACAGAAGCAAAATACAAGGGAAGCTATGATGATATTTCATGCATAGTTGTTATGTTCTAG 1092 0.4103 MKAHSNLHKRKSTLIAADGNHAVFKKTTRKGSFVDTLEQKQAEDILTREKKYNEDEDNNDADDNNTEEKAGDDDQQEEGEYLLGDDGPTTVTEDGIHKGLFMKDTDEENKTSTRHFSHGCHLMEGEMIHGMEDYVFAKHMKLNGYDLGLYAIFDGHAGRDVAKYLQSHLFENILSEPDFWENPVQAVKKACKATDDEILENIADSRGGSTAVAAILINGVKLLVINVGDSRAISCKNGLAKQLTVDHEPEKEKDLVESRGGFVIKRPGDVPRVDDQLAMTRAFGDGKLKEHITAEPDVMIKKMDEDTEFIILASDGLWKVMTNQEACDCIKDVDDAQKAAKKLVTEAKYKGSYDDISCIVVMF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1544 363 SUPERFAMILY PP2C-like 115 363 IPR036457 -
Tpr3g1544 363 ProSiteProfiles PPM-type phosphatase domain profile. 117 363 IPR001932 -
Tpr3g1544 363 SMART PP2C_4 107 361 IPR001932 -
Tpr3g1544 363 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Tpr3g1544 363 CDD PP2Cc 131 361 IPR001932 -
Tpr3g1544 363 Pfam Protein phosphatase 2C 145 356 IPR001932 -
Tpr3g1544 363 MobiDBLite consensus disorder prediction 58 81 - -
Tpr3g1544 363 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 56 363 - -
Tpr3g1544 363 MobiDBLite consensus disorder prediction 45 89 - -
Tpr3g1544 363 Gene3D - 112 363 IPR036457 -
Tpr3g1544 363 PANTHER ALPHABET, ISOFORM E-RELATED 56 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1544 Tpr-Chr3 13868422 13872173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1544 114 363 PP2C-type Phosphatase Gene Family AT3G15260 58.566 6.97e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1544 - - gmx:100814772 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1544 3 13868422 13872173 Tpr3g1544 3 13868422 13872173 ECH