Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1530 ATGGAAAAGGAGCCACTGCTCCCATATTTCAGCCCAAGGAAGAAGCTTTCACCATTGTCACATCATCTTTTTCCTTTACCTGAAAATGATGAAATGGTTGTTCCTGTTACCCCTTCTGAGTTCAAAGATCGTCTCATCTTTGGTCCTTCACCTTTGGCTGATCCTTCACCATTGGCTGATGCTTTAAATCTTTCACGTAATTCACCAAGATCTTCTTGTTCATCTTCACAAGATTTTGTTGATTCTTCATCACAGCAAGTATCTTCTTGGCTTTTTGATCCTAATTATCCAAGGGGTAAAACAAATCTTCATCGTTCAAAAACTGCACCTGCTATGGCTGTTATCAGTGATTTCAATCATCGTACATCTGTTAAAAGACCTCAATTTGGTAGCCAATCAATTGTTCATCAAGCTGTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTTATTTATTGGTTCAATCGTCATGATTTTACATCAACAGAAACTCATGTTATAGTAGATGCATTGTATTTTTGTATAGTTACAATGTGCACAATAGGTTATGGTGACATTACACCTAATAGTACTGCAACCAAGATTTTCTCTATATTGTTTGTGTTGATTGGTTTTGGTTTTATTGATATATTGCTTAGTGGAATGGTTAGTTATGTTCTTGATTTGCAAGAGAATCATTTGTTGAGGGCAGTGAAGGGAAGAGGTGGGAAAGATGGTAGGTCATATTTAGTTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTTGCATTGGCACTTTTGGTTGTGGTACTTTGTATTGGACTTGGTGTAGGGGTTATGCATTTTGTCGAAAGCCTTGGATGGGTGGATTCTTTTTATCTTTCAGTTATGTCTGTTACAACGGTTGGATATGGTGATCATGCTTTTAAGACCATGCATGGTCGGATTTTTGCTGCAATTTGGTTGCTTGTGTCAACGCTTGCGGTTGCCCGAGCATTCCTTTATTTGGCTGAGGCCAGAGTGGATAAGCGGCATAGGATGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCTGACATAGACAATAATGGATTTGTGAGTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTGACAGAGAAGGACATCATGCAGGTCAGTGAGAAATTCGATATACTAGATACCGGCAACTGTGGAAAAATAACACTTGGTGATCTCATGGAGAGTCAAAATTGA 1257 0.3874 MEKEPLLPYFSPRKKLSPLSHHLFPLPENDEMVVPVTPSEFKDRLIFGPSPLADPSPLADALNLSRNSPRSSCSSSQDFVDSSSQQVSSWLFDPNYPRGKTNLHRSKTAPAMAVISDFNHRTSVKRPQFGSQSIVHQAVILLVLYLALGVVIYWFNRHDFTSTETHVIVDALYFCIVTMCTIGYGDITPNSTATKIFSILFVLIGFGFIDILLSGMVSYVLDLQENHLLRAVKGRGGKDGRSYLVDVKKGRMRIRMKVALALLVVVLCIGLGVGVMHFVESLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMQVSEKFDILDTGNCGKITLGDLMESQN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1530 418 SUPERFAMILY Voltage-gated potassium channels 131 220 - -
Tpr3g1530 418 ProSitePatterns EF-hand calcium-binding domain. 362 374 IPR018247 -
Tpr3g1530 418 Gene3D - 262 324 - -
Tpr3g1530 418 SUPERFAMILY Voltage-gated potassium channels 248 355 - -
Tpr3g1530 418 Pfam Ion channel 262 333 IPR013099 -
Tpr3g1530 418 Pfam Ion channel 140 220 IPR013099 -
Tpr3g1530 418 PRINTS Two pore domain K+ channel signature 177 205 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr3g1530 418 PRINTS Two pore domain K+ channel signature 296 305 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr3g1530 418 PANTHER TWO-PORE POTASSIUM CHANNEL 3 83 413 - -
Tpr3g1530 418 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 83 413 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr3g1530 418 Gene3D - 325 418 - -
Tpr3g1530 418 SUPERFAMILY EF-hand 354 414 IPR011992 -
Tpr3g1530 418 Gene3D - 132 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1530 Tpr-Chr3 13733516 13739159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1530 4 415 Ion Channels AT4G18160 61.556 2.06e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1530 K05389 - gmx:100804249 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1530 3 13733516 13739159 Tpr3g1530 3 13733516 13739159 ECH