Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1524 ATGGCCGCATCATCCATGGCTCTCACTTCACCTGCCTTGGCTGGCAAGCCAGTCAAGCTGACCCCCTCAAGCCAAGAATTGGGAGTTGCAAAGTTTACCATGAGGAAGGGTGCTACCACCAAGAAAGTAGCCTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGCCCCCGTCTTACTTGACTGGAGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGACTTTCTGCTGACCCAGAGACATTCGCCAAGAACCGTGAGCTTGAAGTTATCCACTCTAGATGGGCTATGTTAGGAGCCTTGGGATGTGTTTTCCCGGAGCTTTTGTCTCGCAACGGTGTTAAATTCGGTGAGGCTGTTTGGTTCAAGGCCGGATCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGTTTGGTCCACGCTCAAAGTATCCTTGCCATCTGGGCCACTCAAGTTATCTTGATGGGCGCAGTTGAAGGATACCGTATTGCAGGTGGGCCTCTTGGTGAAGTAGTTGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTAGGCCTAGCTGACGACCCAGAAGCTTTCGCAGAATTAAAGGTTAAGGAACTCAAAAACGGTAGGTTAGCTATGTTCTCTATGTTTGGATTCTTTGTCCAGGCTATTGTGACCGGAAAGGGTCCTTTGGAGAACCTTGCTGACCATCTTGCTGACCCAGTCAACAACAACGCCTGGGCTTTTGCCACCAACTTTGTTCCCGGAAAGTGA 801 0.5119 MAASSMALTSPALAGKPVKLTPSSQELGVAKFTMRKGATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1524 266 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Tpr3g1524 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 266 IPR001344 GO:0009765|GO:0016020
Tpr3g1524 266 SUPERFAMILY Chlorophyll a-b binding protein 49 263 - -
Tpr3g1524 266 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 266 - -
Tpr3g1524 266 Gene3D Chlorophyll a/b binding protein domain 57 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1524 Tpr-Chr3 13669981 13671147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1524 1 266 Chloroplast and Mitochondria Gene Families AT2G34430 88.060 2.94e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1524 K08912 - jre:108990271 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1524 3 13669981 13671147 Tpr3g1524 3 13669981 13671147 ECH