Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1522 ATGTTATCTCTAAACCTTAAATTGACCATAGTCATACTCATTTCAATTTTATCCATTATCATTTCACATGCTCAAACAACAAAAACAACAATTGAAGTTGAAATTGAAGCATTAAAAGAATTCAAAAAATCCATAACAAATGATCCAAACAAAATCCTTGCAAATTGGATTGACACAACACCTCATTGTAATTGGTCAGGAATTGAATGTAACAACCAAACATCATCAAAACATGTTATATCAATTTCACTTTTTGAACTTCAACTTGAAGGTGAAATTTCACCATTTATTGGTAACATTTCAACTCTTCAACTTCTTGATTTAACTTCAAATTCATTCACTGGTCAAATTCCACCACAAATTGCTCAATGCATTCAACTTACAACACTTTATCTTACTGATAATTCTCTCTCAGGTTCAATTCCTCATGAATTAGGTAACCTAAAAAATTTACAATTTTTGGATTTAGGTAGTAACCATTTCAATGGAACTTTACCTAATAGCATATTCAATGTTACTTCTTTGTTAGGTTTTGCTTTCAATTTCAATAATCTTAGTGGCACAATCCCTTCAAATATAGGAAATTTAGTTAATGTTATACAAATTGCAGGATATGGGAATAGCTTTGTTGGATCTATACCTGTTTCTATAGGTAAATTAGGGTTTTTGAAATCTCTTGATTTTAGTCAAAATAAGTTATCTGGTGTGATTCCTAGAGAGATTGGAAATTTAACAAATTTACAAAATCTGTTATTGTTGGATAATTCATTGAGTGGAAAAATTCCTTCTGAGGTTGCTCATTGTAGAAATCTTGTTTTTCTTGAGTTATATGAGAATGATTTCATTGGAAATATTCCTCATGAGTTAGGAAATTTAGTTCAATTAGAAACTTTGAGGTTATTTGATAATAAGTTGAATTCAACTATACCAGATTCTATATTTAAGTTGAAATCATTAACACATTTAGGATTATCAGAAAATAACTTAGAGGGAACAGTTTCTTCTGAGATTGGATCTTTGAGTTCCTTAAAAGTGTTAACTTTGCATTTAAATAAGTTTACCGGAACGATTCCTTCATCGTTAACAAATTTGAGAAACTTGACATCTCTTTCCATGAGTCAGAATCTTTTTTCTGGTGAAATTCCTTCGAACTTAGGTGTGCTTCATAATTTGAAGTTTCTTGTCTTGAATAACAATTTTTTACATGGTCCTGTTCCTCCTAGCATTATCAATTGTACTAGTTTGGTAAATGTGAGTTTATCTTTTAATGCATTATCTGGGAAAATTCCTGAGGGTTTTTCAAAGCTACCTAATTTGACTTTTTTGTCTCTTGCATCCAACAAAATGAGTGGTGAAATTCCAAATGATCTCTTTAACTGTTCAAACCTTAGTACTCTAAGTTTGGCGGAAAACAACTTCAGCGGATCGATAAAATCCGGTATCAAGAATCTGTTTAATCTCATGCGTTTACAGCTGCATGTAAATGCTTTCGTAGGACCAATTCCACCAGAGATTGGAAACTTGAATAAACTCATCTCTTTGTCTCTTTCTGAAAATAGATTTTCAGGTCATATTCCAATAGAATTGTCAAAACTTTCTCTTCTCCAGGGACTTTCTCTTGATGACAATGTATTAGAAGGTACAATACCTGATAAACTTTCGGAACTAAAACAATTGACTGAACTTTGGCTGCATGACAACAAGTTAGTTGGTCACATACCGGATTCTATCTCAACGCTTGAGATGCTTTCATACTTGGATCTTCATGGAAACAAACTTAACGGTTCCATTCCGAAAAGCATGGGGAAGCTTGATCATCTTTTAATGTTGGATCTCTCTCACAACCAACTCACAGGATCGATTCCCGGAGATGTCATTGGACACTTCAAAGACATGCAGATGTATCTTAACCTTTCTTACAATCACTTTGTTGGAAATGTTCCTTCTGAGTTGGGGATGTTGGAAATGGCACAAGCAATTGATGTTTCAAACAATAATCTTTCAGGTGTTCTTCCAAAGACACTTGTGGGATGCAGAAATATGTTTAGCCTTGATTTCTCAGGAAACAATATTTCAGGTCCTATTCCTGCTGAAGTTTTTAGTGGTATGGACTTGCTTCAAAGCTTAAATCTTTCGAGAAACCATTTAGATGGTGAAATCCCTAAAAGCTTGTCACAGCTTAAGAATCTTAGTTCCTTAGATCTTTCTCAGAATAACTTGAAGGGAAGTATTCCTGAGGGATTTGCCAACCTTTCCAACTTGATGCAGGTCAACTTTTCTTTCAATCAACTTGAAGGTCCTGTACCTTTGACCGGAATCTTTGCGCATATGAATGCATCTAGTATAATGGGAAACCAGGCTCTTTGTGGAGCAAAATTCCTAAGGCCATGCAGAGAGAATGGTCATTCTGTATCCAAGAAGGCCGTAGCTATCCTTGCTTCCCTTGGATCTCTTGCTGTACTTCTACTTGTAGTGCTTCTCATTTTATATCTCAACCGAGGCACCATATTTGGTAATTCTGCAAAGACTGGTAATACTGAGAATCATGAATCAGTGCATGGTTCATCAGTGGGTCTTAAAAGATTCAGTCCAAAGGAATTAGAATATGCCACCGGTTGTTTCAGCTCAGACTACATCATCGGTGCTAGCAGTTTGAGCACCGTTTACAAGGGTCAATTTGAAGATGGTCAGGTTGTAGCAGTAAAAAGCTTGAATTTGCACCAATTCTCTGCAAATACCGACAAGATCTTCAAGAGAGAAGCCAGTACCTTGAGCCAGCTGAGACATAGGAATTTGGTTAAGATACTTGGATATGCATGGGAAAGTCAGAAAATAAAGGCTTTAGTTTTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACATGATAAAGAGGTAGATCAGTCGAGGTGGACATTATCTGAAAGAGTCCGCGTTTTCATTTCTATCGCGAGTGGATTAGATTACTTGCACTCTGGCTATGGTTCTCCCATTGTCCACTGTGATCTTAAGCCTTCTAACATCCTTTTAGATAGAGATTTTGAAGCTCATGTCAGTGATTTTGGAACAGCTCGAATACTTGGTCTTCATCTGCAGGATGGTAGTGCCCTTTCCTCAACGGCAGCTTTGCAAGGCACAGTTGGTTATTTGGCACCAGAATTTGCCTACATGAAGAAAGTAACGACTAAAGTGGACGTGTTCAGCTTTGGTATCATAGTAATGGAATTTCTAACAAGAAAAAGGCCAACAGGGCTCTCAGAAGAGGATAGCTCGCTAATCAGTTTGCGTGATGTAGTGGCAAAAGCCGTTGCAAATGGAACAGAACAGATAATCAACATTGTGGACCCTGAATTGATCACAAAAGACAATGGAGAAGTGTTGGAAGAGCTCTTTAAACTATCATTGTGCTGCACCTTCTCTGAGCCTGAACATCGACCTAATATGAATGAAGTTTTATCTGCACTTATGAAGCTTAAGACAGCAAGATAG 3492 0.362 MLSLNLKLTIVILISILSIIISHAQTTKTTIEVEIEALKEFKKSITNDPNKILANWIDTTPHCNWSGIECNNQTSSKHVISISLFELQLEGEISPFIGNISTLQLLDLTSNSFTGQIPPQIAQCIQLTTLYLTDNSLSGSIPHELGNLKNLQFLDLGSNHFNGTLPNSIFNVTSLLGFAFNFNNLSGTIPSNIGNLVNVIQIAGYGNSFVGSIPVSIGKLGFLKSLDFSQNKLSGVIPREIGNLTNLQNLLLLDNSLSGKIPSEVAHCRNLVFLELYENDFIGNIPHELGNLVQLETLRLFDNKLNSTIPDSIFKLKSLTHLGLSENNLEGTVSSEIGSLSSLKVLTLHLNKFTGTIPSSLTNLRNLTSLSMSQNLFSGEIPSNLGVLHNLKFLVLNNNFLHGPVPPSIINCTSLVNVSLSFNALSGKIPEGFSKLPNLTFLSLASNKMSGEIPNDLFNCSNLSTLSLAENNFSGSIKSGIKNLFNLMRLQLHVNAFVGPIPPEIGNLNKLISLSLSENRFSGHIPIELSKLSLLQGLSLDDNVLEGTIPDKLSELKQLTELWLHDNKLVGHIPDSISTLEMLSYLDLHGNKLNGSIPKSMGKLDHLLMLDLSHNQLTGSIPGDVIGHFKDMQMYLNLSYNHFVGNVPSELGMLEMAQAIDVSNNNLSGVLPKTLVGCRNMFSLDFSGNNISGPIPAEVFSGMDLLQSLNLSRNHLDGEIPKSLSQLKNLSSLDLSQNNLKGSIPEGFANLSNLMQVNFSFNQLEGPVPLTGIFAHMNASSIMGNQALCGAKFLRPCRENGHSVSKKAVAILASLGSLAVLLLVVLLILYLNRGTIFGNSAKTGNTENHESVHGSSVGLKRFSPKELEYATGCFSSDYIIGASSLSTVYKGQFEDGQVVAVKSLNLHQFSANTDKIFKREASTLSQLRHRNLVKILGYAWESQKIKALVLEYMENGNLDSIIHDKEVDQSRWTLSERVRVFISIASGLDYLHSGYGSPIVHCDLKPSNILLDRDFEAHVSDFGTARILGLHLQDGSALSSTAALQGTVGYLAPEFAYMKKVTTKVDVFSFGIIVMEFLTRKRPTGLSEEDSSLISLRDVVAKAVANGTEQIINIVDPELITKDNGEVLEELFKLSLCCTFSEPEHRPNMNEVLSALMKLKTAR* 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1522 1163 SUPERFAMILY L domain-like 557 790 - -
Tpr3g1522 1163 SMART LRR_sd22_2 604 625 - -
Tpr3g1522 1163 SMART LRR_sd22_2 388 420 - -
Tpr3g1522 1163 SMART LRR_sd22_2 727 753 - -
Tpr3g1522 1163 SMART LRR_sd22_2 556 579 - -
Tpr3g1522 1163 SMART LRR_sd22_2 364 387 - -
Tpr3g1522 1163 SMART LRR_sd22_2 148 174 - -
Tpr3g1522 1163 SMART LRR_sd22_2 220 246 - -
Tpr3g1522 1163 CDD STKc_IRAK 880 1159 - -
Tpr3g1522 1163 SMART LRR_typ_2 220 244 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 604 628 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 508 532 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 148 172 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 292 316 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 727 750 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 703 726 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 436 460 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 388 412 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 340 364 IPR003591 -
Tpr3g1522 1163 SMART LRR_typ_2 556 580 IPR003591 -
Tpr3g1522 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Tpr3g1522 1163 SMART serkin_6 874 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1522 1163 Pfam Protein kinase domain 878 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1522 1163 Gene3D Ribonuclease Inhibitor 366 431 IPR032675 -
Tpr3g1522 1163 Gene3D Ribonuclease Inhibitor 529 805 IPR032675 -
Tpr3g1522 1163 SUPERFAMILY Protein kinase-like (PK-like) 849 1158 IPR011009 -
Tpr3g1522 1163 Pfam Leucine rich repeat 659 716 IPR001611 GO:0005515
Tpr3g1522 1163 Pfam Leucine rich repeat 558 617 IPR001611 GO:0005515
Tpr3g1522 1163 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Tpr3g1522 1163 ProSiteProfiles Protein kinase domain profile. 874 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1522 1163 SUPERFAMILY RNI-like 285 626 - -
Tpr3g1522 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 298 383 - -
Tpr3g1522 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 370 1159 - -
Tpr3g1522 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 169 301 - -
Tpr3g1522 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 115 171 - -
Tpr3g1522 1163 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 8 122 - -
Tpr3g1522 1163 Gene3D Ribonuclease Inhibitor 201 363 IPR032675 -
Tpr3g1522 1163 Gene3D Transferase(Phosphotransferase) domain 1 953 1163 - -
Tpr3g1522 1163 PRINTS Leucine-rich repeat signature 607 620 - -
Tpr3g1522 1163 PRINTS Leucine-rich repeat signature 727 740 - -
Tpr3g1522 1163 Gene3D Ribonuclease Inhibitor 432 528 IPR032675 -
Tpr3g1522 1163 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Tpr3g1522 1163 SUPERFAMILY L domain-like 32 306 - -
Tpr3g1522 1163 Gene3D Ribonuclease Inhibitor 31 195 IPR032675 -
Tpr3g1522 1163 Gene3D Phosphorylase Kinase; domain 1 836 952 - -
Tpr3g1522 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 298 383 - -
Tpr3g1522 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 122 - -
Tpr3g1522 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 370 1159 - -
Tpr3g1522 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 115 171 - -
Tpr3g1522 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 169 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1522 Tpr-Chr3 13664435 13668411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1522 8 1160 Receptor kinase-like Gene Family AT5G46330 53.356 0.0 1143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr3g1522 Pkinase 8.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1522 K13420 - gmx:100817960 1630.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1522 3 13664435 13668411 Tpr3g1522 3 13664435 13668411 ECH