Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1518 ATGGCGAAAAAGACTAAACCCTCTCAGAATAAGAACGCTGTTGTTTCTCCAGCCTCCACTTCCACTTCTTCCAGTAAACTAGTGTTGAAGGTTAAATCAAACGAGGGGATGAGGAGATCGGTGCGGCAGACTAAGTCAAGAGAGACTACCAGAGCAAAACAGAAAAAGAACAAACAAAAGATTGATGCTAAGAAGCCAAAGAAACCACCCACTGCTTTCTTCTACTTCTTGGTGGATTTTCGGAAAGAGTTTCAAGACCAGAATCCAGATGTAAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGATAAATGGAAAACAATGACTTATGAGGAGAAGGTTAAATACTATGATATAGCAACAGAAAAACGTGCAGAATTTGATAGAGCAATGACAGAGTATAACAAGAAAATGGAAAACGGCGATTTTGAAGAAACTGACGAGGAGTCAGAATATGACGAGTAA 465 0.4 MAKKTKPSQNKNAVVSPASTSTSSSKLVLKVKSNEGMRRSVRQTKSRETTRAKQKKNKQKIDAKKPKKPPTAFFYFLVDFRKEFQDQNPDVKSMRDIGKACGDKWKTMTYEEKVKYYDIATEKRAEFDRAMTEYNKKMENGDFEETDEESEYDE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1518 154 MobiDBLite consensus disorder prediction 1 67 - -
Tpr3g1518 154 MobiDBLite consensus disorder prediction 1 30 - -
Tpr3g1518 154 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 66 135 IPR009071 -
Tpr3g1518 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 1 153 - -
Tpr3g1518 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 1 153 - -
Tpr3g1518 154 MobiDBLite consensus disorder prediction 32 50 - -
Tpr3g1518 154 SMART hmgende2 65 136 IPR009071 -
Tpr3g1518 154 SUPERFAMILY HMG-box 52 143 IPR036910 -
Tpr3g1518 154 CDD HMGB-UBF_HMG-box 66 131 - -
Tpr3g1518 154 Pfam HMG (high mobility group) box 66 135 IPR009071 -
Tpr3g1518 154 Gene3D High mobility group box domain 49 150 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1518 Tpr-Chr3 13629655 13633222 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Tpr3g1518 HMG_box 3.1e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1518 - - gmx:100809401 175.252