Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1514 ATGCAGACTCACAATTATTTTCATCCGGGAAAGGCGGTACTTCCTTTGGCAGATGAAGCCATTGGTACTTATATGAATGCTCCACATGCTTCTGCATTTGATGCAGCTTTACCTCCGGGTGTGAGGCAGATGACACCATTTGAAAGGTTTAACTTGCAGCCCTCAGAGGTTTGCCCTAAGAATTTCATCGTCTTTGATCAAACGGATCAACAGAACAGGATTTTGTTCCATCCTGCGACGACCTACAAGTTTAACAGTCCTGGCTTCAACACTCATGCTACTTATACCCAAGATTTTGAAAAAGATAAAATTAATCAAATGGAAAGGGAATTGTCATCTTCTTTTGAAGAGGACTCTAAGGACATTGATGCGTTGATGAGCCTAGACTCGGACGAACTGGAAAACTATGACGACGAAGAAGTCAGCACAGCAAGGACTCATGAAAAAGACGATAGTACATCTGATACTTGCTCCAGTTATTGCACGAAATCAAGGAAGAAGAAAAGGTTGTTACCATCTTCTGTACAAAACTCTTCCGGGACAAAGGGTTACTGCAACAGTGAAAAGAAACAACACCTAGAGATGAAGAGGATGGTGAAAATGTTGAGAAATATTGTGCCTGGTGGAGGCAACCAAATGGACACTGTTACCGTTTTGGACGAAGCTGTAAAATACCTCAAAACTCTCAAGGTTGAAGTGGAGCAATTCGGTATTGGACCGTGA 723 0.4219 MQTHNYFHPGKAVLPLADEAIGTYMNAPHASAFDAALPPGVRQMTPFERFNLQPSEVCPKNFIVFDQTDQQNRILFHPATTYKFNSPGFNTHATYTQDFEKDKINQMERELSSSFEEDSKDIDALMSLDSDELENYDDEEVSTARTHEKDDSTSDTCSSYCTKSRKKKRLLPSSVQNSSGTKGYCNSEKKQHLEMKRMVKMLRNIVPGGGNQMDTVTVLDEAVKYLKTLKVEVEQFGIGP* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1514 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 229 IPR011598 GO:0046983
Tpr3g1514 240 PANTHER TRANSCRIPTION FACTOR BHLH145 1 239 IPR037546 -
Tpr3g1514 240 MobiDBLite consensus disorder prediction 127 156 - -
Tpr3g1514 240 Gene3D - 184 236 IPR036638 GO:0046983
Tpr3g1514 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 235 IPR036638 GO:0046983
Tpr3g1514 240 MobiDBLite consensus disorder prediction 139 154 - -
Tpr3g1514 240 PANTHER TRANSCRIPTION FACTOR BHLH144 1 239 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1514 16 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 39.256 6.83e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1514 - - mtr:MTR_4g096660 404.06