Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1496 ATGGCTTCAAGAGTAGACACAGATGAAGATGGTGACAAAGGTAGTATGTGGGATTTGGATCAGACGATTGATCAACCGATGGATGAAGAAGCAGGGAGACTCAGAAATATGTATAGAGAAAAAAAATTTTCTGCATTGTTGATTCTGCGGCTTGCGTATCAGAGTCTTGGCGTGGTTTATGGAGATTTGGGCACTTCACCCTTGTATGTTTTCTACAATACATTTCCTAATGGTGTTAAAGATGAAGATGAAGTACTTGGAGCTCTTTCTTTGATTATCTACTCTCTTACTTTGGTTCCTCTCCTCAAATATGTCTTTGTTGTGTTAAGAGCAAATGACAACGGACAAGGTGGAACATTTGCGCTTTATTCTTTGCTTTGTCGACATGCAAAGATAAAAACCATTCCCAATCAGCATCGCACTGATGAAGAACTGACAACTTATAGTCGTTCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACTAAAAGATGGTTGGAGGAACGAGAATCATGGAAGAGTGCCATTCTTATTCTTGTCCTTGCTGGCACCTGCATGGTTATCGGAGACGGGATTCTTACCCCGGCTATATCAGTTTTATCAGCTGTTGGTGGCATCAAGGTAAATCAGCCCAATATGAGCAGTGGTGTGGTAGTTTTGGTTGCGGTTGTAATATTAATTGGATTTTTCAGCATGCAACATTATGGAACGGACAGAGTTAGTTGGCTCTTTGCTCCAATTGTCCTCCTTTGGTTTCTCCTAATAGGAGGTATTGGTATATTTAACATATGGAAGCATGGAATCAGAGTCCTAAAAGCTTTTTCTCCTGTTTATATATATCACTATTTTAGAAGAGGTGGAAAACATGGATGGACTTCCCTTGGTGGTATCATGCTCAGTATAACAGGGACGGAGGCTCTTTTTGCTGACCTGGCTCATTTTCCGGTCTCAGCTGTACAGCTTGCATTTACTCTAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCATACCTTATGAATAACTTGACTCATTCAAAAGATGCTTTTTATCGTTCTATTCCAGAGAGAATATACTGGCCGGTATTTGTTGTTGCAACAGCGGCAGCTATAGTTGCAAGCCAGGCGACAATAACTGCAACTTTTTCAATTATTAAGCAAGCTCTTGCTCATGGTTGTTTTCCTAGAGTTAAAGTTATATATACATCAAAAAAATTCGCTGGCCAGATATATATTCCAGATATCAATTGGATCCTTATGATTCTTTGCATTGCCGTGACGGCTGGGTTCGAAAATCAAAACCAGATTGGAAATGCTTATGGTACCGCAGTTGTGATTGTCATGCTCGTTACGACATTCCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCACTGGATTCTTGTACTCGCCTTCACCAGCTTATCGTTGATCGTTGAATTCTCATACTTCTTCTCCGTAATCTTCAAAGTTAATCAAGGTGGATGGGTTCCACTTGTAATCGCTGGAGCATTTCTTATTATTATGTATGTTTGGCATTATGGTACAGTGAAACGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGGCTTGGCCCAAGTTTAGGACTCGTTCGTGTACCTGGAATCGGACTAGTCTACACAGAACTGGCAAGTGGAGTACCACCGATTTTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCCGTAGTTGTATTCGTATGTGTCAAATACCTTCCTGTCTACACCGTCCCGGAAGAAGAAAGATTCCTTGTTAAGAGGATTGGACCTAAGAATTACCACATTTTTCGATGTGTCGCACGGTATGGCTACAAAGACCTTCACAAAAAAGACGACGAGTTTGAGAAAAAACTCTTCGACAACCTTTCGTTGTTTGTTAAGCTTGAATCTATGATGGAAGGTTGTTCAGATTCAGATGAATACAGTATAACCGGACACCAAACAGAATGGTCAAGAGATGGCTTGTTGAATGGCACTGGAAGCACAGTTTCTTCAAATGTGGAGCTAACAATTAATTCAATAGATTCAATAGTACAAGTTAGATCGCCGCCGCATGCAAATATTACAGTTAGGTCCTCCGGTCATGTAAGCAGCCAAAATGAGGTCGATGAACTTGAATTTTTGAATAGCTGCAGGGATGCCGGGGTGGTTCATATATTGGGAAACACAGTTGTGATGGCAAGGAGGGATTCAAATTTCTTCAAGAAAGTAGCTGTCGATTATATTTATGCGTTTCTTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGATTTTCTATGTATAG 2373 0.405 MASRVDTDEDGDKGSMWDLDQTIDQPMDEEAGRLRNMYREKKFSALLILRLAYQSLGVVYGDLGTSPLYVFYNTFPNGVKDEDEVLGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEERESWKSAILILVLAGTCMVIGDGILTPAISVLSAVGGIKVNQPNMSSGVVVLVAVVILIGFFSMQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKHGIRVLKAFSPVYIYHYFRRGGKHGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYSGQAAYLMNNLTHSKDAFYRSIPERIYWPVFVVATAAAIVASQATITATFSIIKQALAHGCFPRVKVIYTSKKFAGQIYIPDINWILMILCIAVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVLAFTSLSLIVEFSYFFSVIFKVNQGGWVPLVIAGAFLIIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPPIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDEFEKKLFDNLSLFVKLESMMEGCSDSDEYSITGHQTEWSRDGLLNGTGSTVSSNVELTINSIDSIVQVRSPPHANITVRSSGHVSSQNEVDELEFLNSCRDAGVVHILGNTVVMARRDSNFFKKVAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1496 790 PANTHER POTASSIUM TRANSPORTER 2 789 - -
Tpr3g1496 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr3g1496 790 TIGRFAM kup: potassium uptake protein 51 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr3g1496 790 Pfam K+ potassium transporter 53 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1496 Tpr-Chr3 13356615 13362380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1496 1 790 Inorganic Solute Cotransporters AT1G31120 77.057 0.0 1218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1496 K03549 - gmx:100776628 1381.31