Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1458 ATGAGTTCAGTGGCACCATATTCAGTTGGGACTTGTCTCACTTCATTGCACCTCCAAAAACGTAACCATTCTGCATCATCATCAACTTCACTAACAACAACAACAAAATGTTCTTCTGTTCAACAACCACCACTTCTTGTACAAAAGGAGAATCAATTGAACAGAAGAGAAGCAATAACCCTCTCCATGAGTTTTGGCCTTCTTCATTCTTTCTTACAACCTCTCACTGCAACAGCAGCAGAAGCGGTTCCATGTGAATTAACAGTTTCTCCTTCAGGCCTATCCTTTTGTGATAAAGTTGTTGGCACCGGTTCTCAAGCTGTTAAGGGACAACTTATTAAGGCACATTATGTTGGGAGATTGGAGAATGGAAAAGTTTTTGATAGCAGTTACGATCGAGGCAAGCCACTTACGTTTCGCGTTGGTGTTGGAGAGGTTATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAATTCCTCCTATGCTTACAGGAGGTAAACGTACATTGAAGCTTCCTCCGGAACTTGGATATGGTTCAAGAGGGGCTGGTTGTAGAGGAGGTTCGTGTGTCATTCCTCCGGATTCAGTACTCTTATTTGATGTGGAGTTTGTTAGTAAAGCATGA 630 0.4254 MSSVAPYSVGTCLTSLHLQKRNHSASSSTSLTTTTKCSSVQQPPLLVQKENQLNRREAITLSMSFGLLHSFLQPLTATAAEAVPCELTVSPSGLSFCDKVVGTGSQAVKGQLIKAHYVGRLENGKVFDSSYDRGKPLTFRVGVGEVIKGWDEGILGGDGIPPMLTGGKRTLKLPPELGYGSRGAGCRGGSCVIPPDSVLLFDVEFVSKA* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1458 209 PANTHER - 9 208 IPR044609 GO:0000413|GO:0003755|GO:0061077
Tpr3g1458 209 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 110 209 IPR001179 GO:0003755
Tpr3g1458 209 SUPERFAMILY FKBP-like 87 207 - -
Tpr3g1458 209 Gene3D - 81 209 IPR046357 GO:0003755
Tpr3g1458 209 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 9 208 - -
Tpr3g1458 209 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 106 205 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1458 Tpr-Chr3 13002414 13005351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1458 110 207 Calmodulin-binding Proteins AT5G48570 42.857 2.35e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1458 K01802 - ccaj:109792312 263.077