Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1457 ATGAAGACTTCAACATTTTTTATAGTAGTTTTACTTCTTGTGTGTTTCATTTCAATGCCATTTCTAATAGTCCTTGGCCAAGAAGATTTAGATAAAGATACAACTTTGAGAATACTTTTGGAAGTGAAAAAATCTTTTGTCCAAGACCCAGAAAATGTTTTGAGTGATTGGTCAGAAGATAACACTGATTACTGTAGTTGGAGAGGGGTTTCATGTGGTTTGAACTCTTTGGTTGATGACTCGGTGAATATGGTTGGACTCAACCTTTCTGACTCTTCACTCACTGGGTCAATATCACCTGAACTCGGTCGTTTGAAAAACTTGCTCCACCTTGATCTTTCTTCAAATAGTCTTGTGGGTCCCATTCCTACAAATCTCTCTAACCTTGTTTTATTGGAATCTCTGCTTTTGTTTTCTAACCAACTCAATGGCTCTATTCCCACTGAGTTTGGCTCGCTCACGAGTCTCCGAGTCATGCGACTCGGTGACAATGGGTTAACTGGTATGATTCCTGCGTCTCTTGGGAAATTGGTTAACTTGGTCAGTTTTGGCCTAGCTTCATGTGAACTCGCTGGACCGATTCCACCTGAACTCGGTCAACTCAGTCTCTTGGAGAATCTTGTTCTGCAGGACAACGAGTTGATGGGTCCGATTCCATCCGAGTTAGGAAACTGCTCAAGCCTCACCGTGTTCACTGCTGCAAACAACAATCTCAATGGCTCAATTCCAAGTGAACTGAGTCAACTCAAGAATCTACAACTTCTCAACCTTGTCAACAATAGCCTAACAGGGGAGATACCGAGTCAACTCGGTGATATGAGTGAACTCGTTTACCTCAATTTCATGGGGAACCAGCTTGAGGGCACAATTCCACCGTCTCTAGCTCAACTGGGTAATCTTCAAAATCTTGACTTGTCTATGAACAAGCTCAGTGGAGGAATTCCAGAGGAGTTTGGCAACATGCGTCAGCTAGGTTTCATGGTTCTGTCTGGTAACAACCTTAATAGCGTCATACCAAAAACAATATGTTCCAATGCAACAAATTTGGAACATTTGATGCTATCAGAAAATGGACTTTATGGTGAAATTCCAGCTGAATTGAGTCAATGTCAATCACTGAAACAACTTGACTTGTCTAACAATTCACTCAATGGTTCCATACCTCTTGAGCTTTATGGTTTAGTGGAGTTAACTGATCTTTTGCTAAACAACAATAGTTTGGTTGGTTCAATCTCTCCTTTTATAGGGAACTTCAGCAACTTGCAGACACTTGCTTTGTATCACAACAATTTGAAGGGTGATCTTCCTAAAGAGATAGGAATGCTTGGGAAGTTGGAAATTTTATATCTTTATGATAATAGATTATCAGGGTCTATACCTATGGAGATTGGTAACTGTTCCAGCTTACAAATGATTGATTTCTTTGGAAACAGTTTCAAGGGAGAAATTCCCATCACTATTGGAATGCTGAAAGAATTGAATTTCCTTCACCTTAGGCAAAATGAGCTTGTTGGTGAGATTCCTGCCACCTTGGGGAATTGTCATAAACTGAGTATCCTTGATTTGGCTGACAATAAGCTCTCTGGTGCAATTCCTCCAACATTTGGATTCCTTGAGTCATTGGAGAAGCTCATGCTCTACAACAATACTCTTGAAGGTAACCTTCCTCACCAATTGATAAATGTAGCAAACTTGACTAGAGTGAATCTTTCAAAGAATAGGTTTAATGGTAGTCTAGTGGCATTGTGTAGCTCTCAATCGTTTCTTTCTTTCGATGTTACCGACAATGAGTTTGATGGCGAAATTCCGCCTCATCTGGGAAACTCACCCTCCCTTTATAGGCTAAGATTAGGCAACAATAAATTTTCTGGCGAAATTCCAAGGACATTGGGAAAAATCCACGATCTGACATTGTTAGACCTATCAGGAAATTCGCTTACCGGACCAATACCAGCTGAGCTTTCTTTGTGCAATAAACTGACTTACATTGATTTAAACAGTAATCATCTTTATGGACAAATACCAGCATGGCTTGGAAGTTTGCCACAATTGGGAGAGATTAAGCTCTCCTCCAATAATTTTTCGGGAACTCTTCCATTAGGCCTATTCAAATGTTCCAAATTATTAGTCCTCTCTCTGAATGACAACCTTCTCAATGGAAGTCTCCCATCTGATATAGGTGATCTTGCATATCTTAATGTCCTCCGACTTGACCGTAATAAGTTCTCCGGACCGATCCCTCCAGAGGTAGGAAAGCTGAGCAAGCTTTATGAGCTCCAACTCTCCAGGAATAGCTTTAATGGTGAGATGCCAATTGAGATTGGAAAACTTCAAAATCTACAAACCATTTTAGACCTCAGTTACAATAATCTCTCAGGTGGCATACCACCTTCTCTAGGGACTATGTCAAAATTAGAAACACTTGATCTTTCCCACAATCAACTTACAGGAAAAATCCCTCCACAAGTTGGTGAAATGAGCAGTTTGGAAAAGCTTGATCTCTCTTACAACAACCTTCAAGGGAAATTGGACAAGAAGTTCTCCCGGTGGCCAGATGAAGCATTTGAAGGGAACCAACATCTTTGTGGAAGCTCTCAAGACCGCTGCGACAGTGATGATACTTCCGGCAGCGAGCCTTCAGGCCTAAGTGAGTCATCCGTGGTGATAATATCTGCCCTTTCAACTTCGGCTGCAATTGCACTATTGATACTTTCAGTGAGAATCTTCTGCAAAAACAAGCAAGATTATTTAAGGGAAGACAGCAAAGTCACGTCTTATGTCTACTCTTCCTCTTCATCACAAGCGCAGAGACGGCCACTGTTCCAGCTAAGAGCTGCTGGAAAGAGGGATTTCAATTGGGAAGATATCATGGATGCAACAAACAATCTAAACGACGACTTCATGATTGGTTCAGGAGGTTCAGGGAAAATCTACAAAGCTGAATTGACCACTGGAGAGATAGTTGCTGTTAAGAAGATTTCATCAAAAGACGATTTTCTGTTGAACAAAAGCTTCTTAAGAGAAGTTAATACACTGGGGAGAATAAAGCATAGACATTTGGTGAAGTTAATAGGGTTCTGTAGCAATAGAAACAAAGGAGAGGGTTGGAATCTACTGATATATGAGTACATGGAAAATGGAAGTTTATGGGATTGGCTACATGGAAAACCAGGAAATGCAAGCAAATTAAAGAAGAGACTTGATTGGGAGACAAGGTTTAAAATTGCTGTGGGATTGGCTCAAGGAGTGGAGTACCTGCATCATGATTGTGCACCAAAGATCATTCACAGAGACATCAAATCCAGCAACATATTGCTAGATTCCAAAATGGAGGCACATTTGGGAGATTTTGGACTAGCAAAAGCACTCATTGAAAGTTATGACTCTAATACTGAGTCGAATTCTTGTTTTGCAGGATCTTGTGGTTACATGGCACCAGAGTACGCGTTCTCCCTGCGTTCAACAGAAAAAAGTGATGTTTTCAGCTTGGGAATAGTTCTGATGGAACTTGTTAGTGGTAAAATGCCAACAAGTGACTTTTTTGGAGCTGATATGGACATGGTGAGATGGGTGGAGATGCATATTGATATGCATGGCTCTACCCGTGAGAAATTGATAGATCCTGAACTGAAACCTCTTTTCCCTAGTGAATTGTTTGCTGCTTTCCAAGTGCTTGAGATAGCTTTGCAATGCACCAAAGCTACACCACAGGAGAGACCATCTTCAAGGAAAGTATGTGATCTTCTCCTCCATGTATTCAGTAACAGAACCATGGACTTTGAGAAGATGAAATTGGATCATCACAAGTAA 3810 0.4079 MKTSTFFIVVLLLVCFISMPFLIVLGQEDLDKDTTLRILLEVKKSFVQDPENVLSDWSEDNTDYCSWRGVSCGLNSLVDDSVNMVGLNLSDSSLTGSISPELGRLKNLLHLDLSSNSLVGPIPTNLSNLVLLESLLLFSNQLNGSIPTEFGSLTSLRVMRLGDNGLTGMIPASLGKLVNLVSFGLASCELAGPIPPELGQLSLLENLVLQDNELMGPIPSELGNCSSLTVFTAANNNLNGSIPSELSQLKNLQLLNLVNNSLTGEIPSQLGDMSELVYLNFMGNQLEGTIPPSLAQLGNLQNLDLSMNKLSGGIPEEFGNMRQLGFMVLSGNNLNSVIPKTICSNATNLEHLMLSENGLYGEIPAELSQCQSLKQLDLSNNSLNGSIPLELYGLVELTDLLLNNNSLVGSISPFIGNFSNLQTLALYHNNLKGDLPKEIGMLGKLEILYLYDNRLSGSIPMEIGNCSSLQMIDFFGNSFKGEIPITIGMLKELNFLHLRQNELVGEIPATLGNCHKLSILDLADNKLSGAIPPTFGFLESLEKLMLYNNTLEGNLPHQLINVANLTRVNLSKNRFNGSLVALCSSQSFLSFDVTDNEFDGEIPPHLGNSPSLYRLRLGNNKFSGEIPRTLGKIHDLTLLDLSGNSLTGPIPAELSLCNKLTYIDLNSNHLYGQIPAWLGSLPQLGEIKLSSNNFSGTLPLGLFKCSKLLVLSLNDNLLNGSLPSDIGDLAYLNVLRLDRNKFSGPIPPEVGKLSKLYELQLSRNSFNGEMPIEIGKLQNLQTILDLSYNNLSGGIPPSLGTMSKLETLDLSHNQLTGKIPPQVGEMSSLEKLDLSYNNLQGKLDKKFSRWPDEAFEGNQHLCGSSQDRCDSDDTSGSEPSGLSESSVVIISALSTSAAIALLILSVRIFCKNKQDYLREDSKVTSYVYSSSSSQAQRRPLFQLRAAGKRDFNWEDIMDATNNLNDDFMIGSGGSGKIYKAELTTGEIVAVKKISSKDDFLLNKSFLREVNTLGRIKHRHLVKLIGFCSNRNKGEGWNLLIYEYMENGSLWDWLHGKPGNASKLKKRLDWETRFKIAVGLAQGVEYLHHDCAPKIIHRDIKSSNILLDSKMEAHLGDFGLAKALIESYDSNTESNSCFAGSCGYMAPEYAFSLRSTEKSDVFSLGIVLMELVSGKMPTSDFFGADMDMVRWVEMHIDMHGSTREKLIDPELKPLFPSELFAAFQVLEIALQCTKATPQERPSSRKVCDLLLHVFSNRTMDFEKMKLDHHK* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1457 1269 SUPERFAMILY L domain-like 587 844 - -
Tpr3g1457 1269 ProSiteProfiles Protein kinase domain profile. 963 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1457 1269 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Tpr3g1457 1269 Gene3D Ribonuclease Inhibitor 33 186 IPR032675 -
Tpr3g1457 1269 Gene3D Phosphorylase Kinase; domain 1 922 1043 - -
Tpr3g1457 1269 SMART serkin_6 963 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1457 1269 ProSiteProfiles Leucine-rich repeat profile. 804 826 IPR001611 GO:0005515
Tpr3g1457 1269 MobiDBLite consensus disorder prediction 861 880 - -
Tpr3g1457 1269 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 2 1265 - -
Tpr3g1457 1269 SUPERFAMILY L domain-like 43 388 - -
Tpr3g1457 1269 Pfam Leucine rich repeat 782 839 IPR001611 GO:0005515
Tpr3g1457 1269 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Tpr3g1457 1269 Pfam Leucine rich repeat 610 670 IPR001611 GO:0005515
Tpr3g1457 1269 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 1265 - -
Tpr3g1457 1269 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Tpr3g1457 1269 PRINTS Leucine-rich repeat signature 373 386 - -
Tpr3g1457 1269 PRINTS Leucine-rich repeat signature 802 815 - -
Tpr3g1457 1269 SUPERFAMILY L domain-like 314 603 - -
Tpr3g1457 1269 SMART LRR_typ_2 490 514 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 153 176 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 802 824 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 201 225 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 394 418 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 297 320 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 105 129 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 321 345 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 826 857 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 442 466 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 249 273 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 681 705 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 538 562 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 347 370 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 633 657 IPR003591 -
Tpr3g1457 1269 SMART LRR_typ_2 753 777 IPR003591 -
Tpr3g1457 1269 Gene3D Ribonuclease Inhibitor 289 511 IPR032675 -
Tpr3g1457 1269 Gene3D Ribonuclease Inhibitor 581 877 IPR032675 -
Tpr3g1457 1269 ProSitePatterns Protein kinases ATP-binding region signature. 969 992 IPR017441 GO:0005524
Tpr3g1457 1269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1094 1106 IPR008271 GO:0004672|GO:0006468
Tpr3g1457 1269 Gene3D Ribonuclease Inhibitor 514 580 IPR032675 -
Tpr3g1457 1269 SUPERFAMILY Protein kinase-like (PK-like) 947 1249 IPR011009 -
Tpr3g1457 1269 Pfam Protein kinase domain 968 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1457 1269 Gene3D Transferase(Phosphotransferase) domain 1 1044 1267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1457 Tpr-Chr3 12995480 13001054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1457 39 706 Receptor kinase-like Gene Family AT1G17750 37.240 7.87e-103 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr3g1457 Pkinase 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1457 - - gmx:100801889 2009.57