Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1442 ATGGTTGCCCAACAGCCGCAACTTCAGATTCAGACTCAGCAACCTACACCTTCTCCTCAAGATGAAGCTTTGAAGAGGAACACCGATTGTGTTTACTTTCTTGCTTCTCCTTTGACATGCAAAAAGGGAAATGAATGTGAGTACCGCCATAGTGAGTATGCTCGAGTCAATCCTAGAGATTGCTACTATTGGTTGAATGGTAACTGCTTGAATCCCAAATGTTCATTTCGTCATCCGCCTCTTGACGGGTTGTTAGGAACACCAACAGCAACCACTCCTGCTGGAACATCGGTACCCGCGCCACAGATTGCAGCGACATCTGCAGCGCATGCACCTTACAATTCTAGTAAACAAGCCGTCCCTTGCATTTTCTTCCAAAAGGGGTATTGCTTAAAAGGTGACAGATGTGCCTTCCAGCACGGACCGATTCCTAACAATGGCAGTAAATTAGCTACACAGGGCTCACTGACCAACCAAGGAGCTGAGAATCCAAGTTTTAAGAAACCTTTTGGCAGTATTGAAAAACATACGCAGGAAAGGAAAACTTCACAAGGAAACGTTGCAACTTTTGGAGGTGCTGAAGCTAAACCTGTCCAAAAATTTGAAACTGCTCCGCAGAAAAATATATTTAAATTGGAGAAGCGTGTGGCACCGCCACCTGCAGGGTTTGATAGTGATGCTTCGAGATTTAAGACACCTAGTTCTCCACCGCCGGCCAACGGGCCAAATGTATCCCGGTCTAATCGTGTGCATCAACCTCGTGTGCCGGATGATCACAGTTTCCATAGTGGTAAGGACAGCGACGAGTTTCTCAGAGAATCGTCTCCTGGGTTTGATGTTCTTGTAGCTGATGAGCTTAGGAATTCTGATTACTATCATGGGGAAGATGAATTTGGCAAAGCAAGAGGTCAAGATGAAAGAGGCCTAGACTCTCTGAATGAATTCGATGTAGGGCATTCTTCTGATTATAGTTTAGCCGCTGATATTGATCGAGAAAGATTTCGTGGGCCTCAAGGTTATGACTCGTATGATCACTTGCAAGAGCCATATGGTTGGGATCCTAGAAAGGCATCAGCCCATATAGAAAGAAGAACTCATCACAGATCTGGCAGTCCTCCTGACAGTGTTGAGGTGTCAGATCTTCGACACCGTTTATCCAAGCGCAGGAAGGGCAATGGTCTAAAATCTGTCGTTGCTCATGATTATGCCCTTGAGAGCCATGGTGAGGAGCGAAGTCATCGATTCCCTCGGAAGGATTCACACCGGTTACCTTCGAATGAGAGACCTGTCAATAATCGTTTCCGAGGGAGAATAACACTTCCACCAAATGGTGGGGACGGTCACCTAGAGAGGGACTTAGACAGAGGAAGGGACATAGAGAGAGGAAGAGACTCAGACAGAGGAAGAATCAGTAGCAGGCTATCATCTGGAAGGCTGCGAACCCCTCCCGAGGGAAGGTTCCACGATAGAATGAGAGGAAGGTTGTCAGATGATGAGAAGGGAGAGAGGGGAAACTTCAGAGGCCGATCGATGGGGGACCGAAGTGGGTTCTCTGCGCCTAAAAGTCTTGCTGAACTTAAATATGGGAGGAGCACTGATAATAATGAGCAACAATCATTAGGAAAGAGAAAAAGCTTCAGGGATCACCAGCAATATGAAGATGATGTACCATTTGAAGGTCCAAAACCTCTTAGTGAAATTCTGAAGGAAAAGAAAGGGGTCGGAGCTGGCGAAGCCTCCTCCCAGAGTCAAAAATCAGCCTTCAATAACAATGAAGGAATTACCGAAAACGGAGCATTGCCCGAAACCGAAACCAAGGAAGACGAATCCAAGATTCAGGCTGCTGACGGAGTTGAAAATACTGATGCAACTCACGGTCAATCATCCGAAGATGGAATGATATACGACGAAGCTGCCGAAGATCAGGAGTATGAAGGTGATGATCAAAGAGAGGAGGGAGACTATGAATATGAGCAAGGTGATGAGGAGTACGACTACGAACAAGTCGAGGAAGGCGAAAATCAAGAGCAAGAATATATGGAAGATGAAGATGGGGATGACTTTGCCAAGAAGATTGGTGTTGTTCTTTCATAA 2094 0.4608 MVAQQPQLQIQTQQPTPSPQDEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCYYWLNGNCLNPKCSFRHPPLDGLLGTPTATTPAGTSVPAPQIAATSAAHAPYNSSKQAVPCIFFQKGYCLKGDRCAFQHGPIPNNGSKLATQGSLTNQGAENPSFKKPFGSIEKHTQERKTSQGNVATFGGAEAKPVQKFETAPQKNIFKLEKRVAPPPAGFDSDASRFKTPSSPPPANGPNVSRSNRVHQPRVPDDHSFHSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKARGQDERGLDSLNEFDVGHSSDYSLAADIDRERFRGPQGYDSYDHLQEPYGWDPRKASAHIERRTHHRSGSPPDSVEVSDLRHRLSKRRKGNGLKSVVAHDYALESHGEERSHRFPRKDSHRLPSNERPVNNRFRGRITLPPNGGDGHLERDLDRGRDIERGRDSDRGRISSRLSSGRLRTPPEGRFHDRMRGRLSDDEKGERGNFRGRSMGDRSGFSAPKSLAELKYGRSTDNNEQQSLGKRKSFRDHQQYEDDVPFEGPKPLSEILKEKKGVGAGEASSQSQKSAFNNNEGITENGALPETETKEDESKIQAADGVENTDATHGQSSEDGMIYDEAAEDQEYEGDDQREEGDYEYEQGDEEYDYEQVEEGENQEQEYMEDEDGDDFAKKIGVVLS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1442 697 MobiDBLite consensus disorder prediction 402 428 - -
Tpr3g1442 697 Pfam Zinc-finger containing family 25 79 IPR041686 -
Tpr3g1442 697 SUPERFAMILY CCCH zinc finger 117 141 IPR036855 GO:0046872
Tpr3g1442 697 MobiDBLite consensus disorder prediction 175 272 - -
Tpr3g1442 697 ProSiteProfiles Zinc finger C3H1-type profile. 55 81 IPR000571 GO:0046872
Tpr3g1442 697 MobiDBLite consensus disorder prediction 334 697 - -
Tpr3g1442 697 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 11 697 - -
Tpr3g1442 697 PANTHER ZINC FINGER CCCH-TYPE-CONTAINING 11A 11 697 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 634 683 - -
Tpr3g1442 697 Pfam RNA-binding, Nab2-type zinc finger 121 141 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 601 615 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 348 384 - -
Tpr3g1442 697 SMART c3hfinal6 25 52 IPR000571 GO:0046872
Tpr3g1442 697 SMART c3hfinal6 57 80 IPR000571 GO:0046872
Tpr3g1442 697 SMART c3hfinal6 116 142 IPR000571 GO:0046872
Tpr3g1442 697 MobiDBLite consensus disorder prediction 251 272 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 482 509 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 540 573 - -
Tpr3g1442 697 ProSiteProfiles Zinc finger C3H1-type profile. 116 143 IPR000571 GO:0046872
Tpr3g1442 697 Gene3D - 107 185 - -
Tpr3g1442 697 Gene3D - 16 81 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 577 598 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g1442 697 MobiDBLite consensus disorder prediction 447 473 - -
Tpr3g1442 697 ProSiteProfiles Zinc finger C3H1-type profile. 24 53 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1442 Tpr-Chr3 12800187 12803980 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr3g1442 zf-CCCH_3 5.4e-12 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1442 - - gmx:100787836 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1442 3 12800187 12803980 Tpr3g1442 3 12800187 12803980 ECH