Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1404 ATGAAACTTCCCATTCTTGTTGCTGTCGCAGCAACAACATCACTCGTTGCATTTTTCATCATCGGATTCTTAATCTTCCGGTGTCTAAAAAAACCTACACCAAGAAACAACAAAACTCAAGAACACCAAAACACATGTCTTCACTTTTCCATCGAAGAAATAAGAACCGCCACCAAAAACTTCAACGACAGTTTAATCATCGGCAACGGAGGATTCGGAAACGTTTACAAAGGACACATTGAAAGATGTCACGCGCCGGTTGCCATTAAGCGGCTTAAACCGGGTTCAGATCAAGGCGCACATGAGTTCCGAACCGAAATTGAAATGCTTTCGCGGTTTCGTCACCCTCACTTGGTTTCTCTCATTGGTTACTGTAACGAAGGTGGAGAAATGATTCTTGTTTATGATTTCATGGCGCGTGGTACTTTACGGGATCATATCTACGGTTCTAAAAGCCCGCTAACGTGGAATCAACGGCTTGAAATTTGTCTTGGTGCAGCTCGTGGGATTCACTTTCTCCATGCGGGGGATAATGATAACAAACGGATGGTTATTCACCGGGACGTGAAGAGTACGAATATTCTTTTGGATGAGAATTGGGTTGCGAAGGTTTCGGATTTCGGGTTATCGAAAGATGGGCCGAACGGGTCGACCCATGTTACAACTGATGTGAAAGGTAGTATCGGGTATTTGGATCCTGAATATTATGTGAGTCAATGGTTGAGTCAAAAATCTGACGTGTACTCTTTTGGTGTGGTTTTGTTGGAGGTATTGTGTGGAAGAGCACCTATTAAGAGTACGGTGGACAAGCGTGAGGAGATTTTGGTGGCTTGGTTTAAGAAGTGTTTTGATGAAGGGAAAGTTGATCGAACGGTAGATCCTGTTTTGAAGGGAACGATTAAGATGAAGTGTTTGATGAAATTTGTTGAAGTTGCGTTGAGTTGTTTGCATCATCATGGAAAGCAACGGCCTTTGATGAGAGATGTTGTGATGGGGTTGGAGTGTGCGTGGAATTTGCAACATAGTGGGGCCCATGTTAAGGGAAAGGGAAAGAGTGAGGAGGAGAAGGAAATTGGGTTGAAGGAAATTGAGGGTGAGAGTAGTAGTAGTAGCAAGGGCACGACAATAACATCAACATGCAGTGAGGAGCAGCAAGCTTTGGTGATGGCTGGGGTGTACCATGAGAGCTTGGATATCCCATAG 1203 0.4414 MKLPILVAVAATTSLVAFFIIGFLIFRCLKKPTPRNNKTQEHQNTCLHFSIEEIRTATKNFNDSLIIGNGGFGNVYKGHIERCHAPVAIKRLKPGSDQGAHEFRTEIEMLSRFRHPHLVSLIGYCNEGGEMILVYDFMARGTLRDHIYGSKSPLTWNQRLEICLGAARGIHFLHAGDNDNKRMVIHRDVKSTNILLDENWVAKVSDFGLSKDGPNGSTHVTTDVKGSIGYLDPEYYVSQWLSQKSDVYSFGVVLLEVLCGRAPIKSTVDKREEILVAWFKKCFDEGKVDRTVDPVLKGTIKMKCLMKFVEVALSCLHHHGKQRPLMRDVVMGLECAWNLQHSGAHVKGKGKSEEEKEIGLKEIEGESSSSSKGTTITSTCSEEQQALVMAGVYHESLDIP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1404 400 SUPERFAMILY Protein kinase-like (PK-like) 36 335 IPR011009 -
Tpr3g1404 400 SMART serkin_6 61 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1404 400 Gene3D Phosphorylase Kinase; domain 1 27 137 - -
Tpr3g1404 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Tpr3g1404 400 CDD STKc_IRAK 67 334 - -
Tpr3g1404 400 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Tpr3g1404 400 MobiDBLite consensus disorder prediction 346 363 - -
Tpr3g1404 400 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 39 366 - -
Tpr3g1404 400 PANTHER OS07G0166700 PROTEIN 39 366 IPR045272 GO:0004714|GO:0006468
Tpr3g1404 400 ProSiteProfiles Protein kinase domain profile. 61 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1404 400 Pfam Protein tyrosine and serine/threonine kinase 67 331 IPR001245 GO:0004672|GO:0006468
Tpr3g1404 400 MobiDBLite consensus disorder prediction 346 377 - -
Tpr3g1404 400 Gene3D Transferase(Phosphotransferase) domain 1 138 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1404 Tpr-Chr3 12504050 12505892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1404 43 350 Receptor kinase-like Gene Family AT3G51550 58.387 2.66e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr3g1404 PK_Tyr_Ser-Thr 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1404 - - cam:101489535 575.089