Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1385 ATGGGATGTCTTAGTCTCAGAATTGAGAACCATAGACAACAAGACACAATTTCCATGGACAAATCAAATAGCTTTCTTCATAGTCTTATCAAACACTTCAAATTCGGTTCCACCACAGAGAGAAACAATGAAGCTGATTTACAAAGAATGGCTTCACAGGAGCAGAAGATATTTTCTTATGAAACCCTTGTTTCTGCTACAAAGAATTTTAATGCTGTTCATAAGTTAGGTGAGGGAGGTTTTGGACCTGTCTTCAAGGGGAAATTGATTGATGGGAGAGAAGTTGCAGTGAAGAAATTATCACATACATCAAATCAAGGGAAGAAAGAGTTTATGAATGAGGCAAAGTTGTTGGCTCGTGTGCAGCATAAGAATGTGGTGAATTTGTTAGGTTATTGTGTTCATGGAGCAGAAAAGTTACTTGTTTATGAGTATGTTCCTCATGAAAGCCTTGACAAGCTTCTTTTCAAAACTGCAGATAAGAGGGAGCAGCTTGATTGGAAACGTAGGTTTGGGATAATCACAGGTGTGGCAAAGGGATTACTTTATCTCCACGAAGACTCACACCATTGCATAATCCATAGAGACATCAAAGCCAGTAATGTATTGCTTGATGACAAATGGACACCCAAAATTGCTGATTTTGGAATGGCACGTCTCTTCCCCGAAGATCAAAGCCAAGTCAATACGCGTGTGGCTGGTACCAATGGATATATGGCTCCTGAATATATGATGCATGGAAGACTTTCCGTCAAAGCTGACGTGTTTAGCTATGGGGTTTTGCTATTGGAGTTGATCACTGGCCAACGAAACTCTTCCTTTAATTTGGATGTGGAGCACCATAGCCTTCTTGATTGGGCATACAAGATGTACAAGAAAGGCAGGAGCTTAGAAATTGTAGATTCTGCATTAGCATCTACAGTGTTAACAGAACAAGTAGCAATGTGCATTCAGCTTGCTCTGCTATGTACTCAAGGAGATCCACATCTACGTCCGACAATGAGACGAGTAGTGGTGATGCTTTCAAGGAAATCACCACAAAGCCACATGGAAGAACCAACAAGACCAGGAATACCAGGTAGTAGATATAGAAGACCTCCTGGACATTCTGCTTTGTCTTCTACAGTTGGTAGTGGTGCTTCTTATTCTCGATCTTTTGATTCAAGCAACAATTGTACGACGCATACAAACACTGCCACTGGTACAAGTTCAGCAACTGCTGAATTAGACATAAGAGGGAAACGTCCAATGCAGGATTAG 1260 0.4095 MGCLSLRIENHRQQDTISMDKSNSFLHSLIKHFKFGSTTERNNEADLQRMASQEQKIFSYETLVSATKNFNAVHKLGEGGFGPVFKGKLIDGREVAVKKLSHTSNQGKKEFMNEAKLLARVQHKNVVNLLGYCVHGAEKLLVYEYVPHESLDKLLFKTADKREQLDWKRRFGIITGVAKGLLYLHEDSHHCIIHRDIKASNVLLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYMMHGRLSVKADVFSYGVLLLELITGQRNSSFNLDVEHHSLLDWAYKMYKKGRSLEIVDSALASTVLTEQVAMCIQLALLCTQGDPHLRPTMRRVVVMLSRKSPQSHMEEPTRPGIPGSRYRRPPGHSALSSTVGSGASYSRSFDSSNNCTTHTNTATGTSSATAELDIRGKRPMQD* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1385 419 ProSiteProfiles Protein kinase domain profile. 70 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1385 419 PANTHER RECEPTOR-LIKE KINASE 21 394 - -
Tpr3g1385 419 SUPERFAMILY Protein kinase-like (PK-like) 54 343 IPR011009 -
Tpr3g1385 419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 394 - -
Tpr3g1385 419 CDD STKc_IRAK 76 343 - -
Tpr3g1385 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Tpr3g1385 419 Gene3D Transferase(Phosphotransferase) domain 1 146 355 - -
Tpr3g1385 419 MobiDBLite consensus disorder prediction 371 407 - -
Tpr3g1385 419 Gene3D Phosphorylase Kinase; domain 1 32 145 - -
Tpr3g1385 419 Pfam Protein tyrosine and serine/threonine kinase 73 340 IPR001245 GO:0004672|GO:0006468
Tpr3g1385 419 MobiDBLite consensus disorder prediction 343 419 - -
Tpr3g1385 419 SMART serkin_6 70 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1385 Tpr-Chr3 12344778 12349136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1385 58 358 Receptor kinase-like Gene Family AT4G11530 51.815 2.00e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g1385 PK_Tyr_Ser-Thr 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1385 - - gmx:100795769 654.055