Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1379 ATGTTATGGTTTAAGAAATCACTACATTGCAAACCTCAATCATCAGAGGTTCATGATCCAAAGGCAAATAGGCATCACAAAATAAAAAACAACAAAGACAAAAGTGTCAAAAATTGCATAAATGGTAGCTCTAGTCATCATGACATGCTTAATCATGTTACTCATGATATTGTTTTTGATAGCAAAAGTGGTGAGATTAAATGTTATCCTTGTTTTCAAAACAATGAAGTTTCTTCTTCTCATAGATCAACTAAGGGAACCAAGATTTCAACAAAATCACATTATGTTGATTGTGATGAATGTTTTGTTTTCTCAAAGTCAAAGGTGACAATTGTGAAAGAGTCAAATGATTTATTTCCGGGTACAACTTTTCCTCTTGCCACCATTGAAGAACATGATATCTCTGAGCATTCAGTGATCAATCTTCAAAGACAAGATTCATCTTGGCAAATTATCAAAAAAATATGTGAAGTTAACAATGACAATAGTGAAAGCAAAGCAATATTACAAATTGAACATGTCTTGAAAGTCCAAAACATGCAAGAAACATTTGCAAGCTTTGAGGAATTTAGAGAAACTACAAAAATTAATGCTGAAAAGCTACAAATTAAGCACCCTAGGTGTTTAGTTGATGGAAATGAGATGTTAAGGTTTCATGGTACAACCATTGCATGTTCCCTTGGTATAAATGGTTCTTCTAATCCATGCACTTTAGATCAATGTGGTTTATGCCAAATTTTGAGGCTTGGTTTCTCTGCCAACCAAAAATTTGAAGATACTATTGGTGTTTTCACAGCTTCTACATGTGGAAAAGCTTTTGATTCTATTAAGTCTTTGAATAAACCATTCATGAGAAAATGTGTTATAGTGTGTAGGGTGATAGCTGGGAGAATCAACAATCCTTTGCAAGAGATACAAGAAATGAGCGATTCAGATTATGATTCTTTGGTTAAAAGCATAAATTGTCAATTAGATATTGAAGAACTTATTGTTTTAAATCCAAGAGCTGTTCTCCCTTGTTTTGTGGTAATGTACACATTATGA 1044 0.3276 MLWFKKSLHCKPQSSEVHDPKANRHHKIKNNKDKSVKNCINGSSSHHDMLNHVTHDIVFDSKSGEIKCYPCFQNNEVSSSHRSTKGTKISTKSHYVDCDECFVFSKSKVTIVKESNDLFPGTTFPLATIEEHDISEHSVINLQRQDSSWQIIKKICEVNNDNSESKAILQIEHVLKVQNMQETFASFEEFRETTKINAEKLQIKHPRCLVDGNEMLRFHGTTIACSLGINGSSNPCTLDQCGLCQILRLGFSANQKFEDTIGVFTASTCGKAFDSIKSLNKPFMRKCVIVCRVIAGRINNPLQEIQEMSDSDYDSLVKSINCQLDIEELIVLNPRAVLPCFVVMYTL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1379 347 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 346 - -
Tpr3g1379 347 Gene3D - 130 346 - -
Tpr3g1379 347 SUPERFAMILY ADP-ribosylation 139 346 - -
Tpr3g1379 347 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1379 Tpr-Chr3 12296264 12297907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1379 126 344 C2H2 Transcription Factor Family AT5G54630 49.782 2.08e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1379 - - cam:105851073 442.58