Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1374 ATGAAGAGAGAGCATAAACAAGAACACGAAGATGCTACCATGAGTGGTAGTAAATCAGAGATTTGTTGGGAAGACGACGGTGGTATGGATGAACTTTTAGCTGTGGTTGGTTACAAAGTGAAATCATCAGACATGGCTGAAGTTGCTCAAAAGCTTGAACAACTTGAACAAGCTATGGGTAATTTTCAAGACCAAGATGAATCAACCATCGCTCAACAACTCTCAAACGACACCGTTCATTACAATCCTTCTGATATTTCCAACTGGCTTCAAACTATGCTTTCCAATTTTGACCCTCAACCTGATCCAACCGTTTCATCTTCTTCCGATAATGACCTCAACGCCATTCCCGGTAAAGCTATTTACGCCGCCGCTAACACTGTTGTCCCTGTCGTCGATGATGATGATGATAATGATGATTTTCCTTCTCCGAAACGAGTTAAACGAACTGACTCAACTCGTCCTGTTGTAATGGTGGTTGAAACACAAGAAAAAGGGATTCGTCTTGTTCATACTTTAATGGCTTGTGCTGAAGCAGTTGAACAGAACAATCTAACGGTTGCAGAAGCTTTGGTGAAACAGATCGGTTACTTAGCTGTGTCACAAGAAGGTGCTATGAGAAAAGTTGCTACCTATTTCGCTGAAGGTTTAGCTCGGCGAATCTACGGTGTATTTCCACAACATTCTATTTCCGATTCACTTCAGATCCATTTCTATGAAACTTGTCCTTATCTCAAATTCGCTCATTTCACTGCGAATCAAGCTATTCTTGAAGCTTTTCAAGGAAAATCTAGGGTTCATGTTATTGATTTTTCGATCAATCAAGGGATGCAGTGGCCAGCGCTTATGCAAGCACTTGCTTTACGTCCTGGTGGTCCACCTGCTTTTCGTCTCACCGGAATTGGTCCACCGGCGTCTGATAACTCCGATCATCTTCAACAAGTTGGTTGGAGACTTGCTCAGTTTGCTCAAACGATTCATGTTCAGTTTGAATATCGTGGTTTTGTTGCTAATAGTCTTGCTGATCTTGATGCTTCGATGCTTGAACTCCGTTCACCGGAAACTGAATCTGTTGCTGTTAACTCTGTTTTTGAGCTTCATAAACTCAACGCGCGTCCCGGTGCGCTTGAAAAGGTTTTTTCTGTTATCCGTCAGATTCGCCCGGAGATTGTTACCGTTGTTGAACAAGAAGGGAATCATAACGGACCGGCTTTTCTAGACCGGTTTACTGAGTCACTTCATTATTACTCAACTCTGTTTGACTCGTTGGAAGGTTCATTGGTTGAACCGCAAGACAAGGCTATGTCGGAGGTTTATCTAGGGAAACAAATCTGCAACGTGGTGGCGTGTGAAGGAACGGACCGGGTTGAACGTCATGAGACTTTGAACCAGTGGAGGAACCGGTTTAATTCAGCTGGGTTTTCTCCGGTTCATTTGGGTTCTAATGCTTTCAAGCAAGCGAGTATGTTGTTAGCACTTTTTGCCGGTGGGGATGGTTACAAGGTGGAAGAGAATGATGGTTGTCTTATGCTTGGTTGGCATACTAGGCCTTTGATTGCTACTTCTGCTTGGAAACTCGCCGCCGTTAACTCTGTGGTGGTTTCACACTGA 1611 0.4364 MKREHKQEHEDATMSGSKSEICWEDDGGMDELLAVVGYKVKSSDMAEVAQKLEQLEQAMGNFQDQDESTIAQQLSNDTVHYNPSDISNWLQTMLSNFDPQPDPTVSSSSDNDLNAIPGKAIYAAANTVVPVVDDDDDNDDFPSPKRVKRTDSTRPVVMVVETQEKGIRLVHTLMACAEAVEQNNLTVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYGVFPQHSISDSLQIHFYETCPYLKFAHFTANQAILEAFQGKSRVHVIDFSINQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDHLQQVGWRLAQFAQTIHVQFEYRGFVANSLADLDASMLELRSPETESVAVNSVFELHKLNARPGALEKVFSVIRQIRPEIVTVVEQEGNHNGPAFLDRFTESLHYYSTLFDSLEGSLVEPQDKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRNRFNSAGFSPVHLGSNAFKQASMLLALFAGGDGYKVEENDGCLMLGWHTRPLIATSAWKLAAVNSVVVSH* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1374 536 SMART DELLA_2 30 107 - -
Tpr3g1374 536 MobiDBLite consensus disorder prediction 1 15 - -
Tpr3g1374 536 Coils Coil 38 65 - -
Tpr3g1374 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 526 IPR005202 -
Tpr3g1374 536 Pfam GRAS domain family 169 525 IPR005202 -
Tpr3g1374 536 ProSiteProfiles GRAS family profile. 160 525 IPR005202 -
Tpr3g1374 536 Pfam Transcriptional regulator DELLA protein N terminal 30 101 IPR021914 -
Tpr3g1374 536 MobiDBLite consensus disorder prediction 1 22 - -
Tpr3g1374 536 PANTHER DELLA PROTEIN GAI1-RELATED 13 526 IPR030006 GO:0003712|GO:0005634
Tpr3g1374 536 Gene3D - 28 97 IPR038088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1374 Tpr-Chr3 12247458 12250331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1374 24 527 GRAS Transcription Factor Family AT1G14920 69.157 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g1374 GRAS 1.1e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1374 K14494 - gmx:547718 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1374 3 12247458 12250331 Tpr3g1374 3 12247458 12250331 ECH