Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1365 ATGAGGAAGAATTTGAACTTGGAACTCCGTCTTTTCCCTCTCTCAAATTCCGATCTTTGTAACACAATGAAAGAAGAAGAAGAAGAAGAAGTAGCAGAAAGCAGTGAGAGTCCACTACAAGATAACCAACACCGGCCATTGACCATTGTCTATGATGGCAAGATTTGCGTTCATGATGCTACAGAGATTCAGGCCAGATCAATTTTAATGTTTGCAAATAAAGAAATGGAGGAAAGAGTTAGGACACCAACTGGAACATCATCAGAGCCATCTTCACCATCAGTATTTAACTTATATAGCCCTGCCACTTCTCCTTCCATGAAAAAATCACTGCAGAGGTTTCTCCATAAGAGGAAGAATCGGATCCAAGAAGCAGCCCCTTACCATCGATCTCAAGATAAATGA 405 0.4074 MRKNLNLELRLFPLSNSDLCNTMKEEEEEEVAESSESPLQDNQHRPLTIVYDGKICVHDATEIQARSILMFANKEMEERVRTPTGTSSEPSSPSVFNLYSPATSPSMKKSLQRFLHKRKNRIQEAAPYHRSQDK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1365 134 ProSiteProfiles Tify domain profile. 40 74 IPR010399 -
Tpr3g1365 134 Pfam Jas motif 102 128 IPR018467 -
Tpr3g1365 134 MobiDBLite consensus disorder prediction 24 44 - -
Tpr3g1365 134 Pfam tify domain 45 73 IPR010399 -
Tpr3g1365 134 PANTHER - 1 129 - -
Tpr3g1365 134 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 129 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1365 Tpr-Chr3 12154619 12157735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1365 1 129 Tify Gene Family AT1G30135 40.909 8.36e-22 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr3g1365 tify 7.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1365 - - gmx:100305565 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1365 3 12154619 12157735 Tpr3g1365 3 12154619 12157735 ECH