Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1358 ATGGAGGAGGATGAGATTCAAGCACAACATAAATTCCCTAGAGTTGGTAATGAAGATGATAATAATGGAAGAAGAGGAGATGTTAACAGGTTCAATAGTTGGCATCATTCTTCAAGAATCATAAGGGTTTCAAGAGCTTCTGGTGGAAAAGATAGGCATAGTAAGGTTATGACTTCAAAGGGTTTAAGAGATAGAAGAGTTAGGCTTTCTGTTACAACAGCTATTCAATTCTATGATCTTCAAGATAGACTTGGTTATGATCAACCAAGTAAAGCTGTTGAATGGTTGATTAAATCTGCTTCTGATGCTATTTCTGAATTACCTTCACTTAACAACTCATTATTCACTGATATTAATAATAATAATAATCAACTAAGTGAACAAGGTGTTGATTCAGTTCATGATGCTGAAATGGTTGTTGAGAATGGTGAAAATAATTATCATGGTCAGAATCTTTCTTTGTCTAAATCTGGTTGTAGTAGCACTTCTGAAACAAGTAAAGGTTCTGGTTTATCACTTTCAAGATCTGATGTTCGTGTGAGCCGTGTCAAGGCTAGAGAAAGAGCTAGGGAAAGAACAGCTAAAGACAAAGAAAAAGAGAATCATCATGACAATGTTAACCCTCATCAGCATCATCAACATCAACATCATAATGTGCACTCTTCAATTTCTCAAACAGCTTCATTCACTGAACTTCTTACTGGTGGAATCAACAATGCAGTTCCTACTACAAATAGTCCAAGAGGGTCAGTTGATGAACCTAGTTTCTTCAACAAAGCAAGACAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCAATGGAGTTCTTCAGCACCAATGGATCATTACTTTAGTCCAATGTTTCTAGGATCTTCATCATCGAGAACACATCATCATCATCATCAATTAGGACATTCACTTCATGATCATCAATCAATGACAATGTCGTCGCCATTCAATAGTGGTGAAAACCATTCAGCAGATCAGAATCAGAATCAGCATCAGAATCATTTGCAGCATCAATTTGCATTTTTACCTGATCATATGATGCAAAATGTGGTTACTTCTTCTTCTACTCAACCAAGCGGGGGGGACAATGATTATAATCTAAACTTCACGATATCTTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCACCGTCTCTTTTGTCTCATCTTCAAAGGTTTTCAGTTTCATCTTTAGATGGATCCAACAATCTACCATTTTTCATGGGAGGAGGAGGAGGAGCTGCTTCTGCTTCTCCTGCTTCAGCTTCACCTGCTCCTACTGCAATGGAGAGTAATCATAATCACAATCATCACCACCAGATTCAACACCATCAGTTTTCATCTGTATTTGATGGTAGCAGCTTGCAGCTCTATTCAGATCAGAAAGGGAAATCCAAAAACTGA 1425 0.3839 MEEDEIQAQHKFPRVGNEDDNNGRRGDVNRFNSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNSLFTDINNNNNQLSEQGVDSVHDAEMVVENGENNYHGQNLSLSKSGCSSTSETSKGSGLSLSRSDVRVSRVKARERARERTAKDKEKENHHDNVNPHQHHQHQHHNVHSSISQTASFTELLTGGINNAVPTTNSPRGSVDEPSFFNKARQQQQQQQQQQQQWSSSAPMDHYFSPMFLGSSSSRTHHHHHQLGHSLHDHQSMTMSSPFNSGENHSADQNQNQHQNHLQHQFAFLPDHMMQNVVTSSSTQPSGGDNDYNLNFTISSGLAGYNRGTLQSNSPSLLSHLQRFSVSSLDGSNNLPFFMGGGGGAASASPASASPAPTAMESNHNHNHHHQIQHHQFSSVFDGSSLQLYSDQKGKSKN* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1358 474 MobiDBLite consensus disorder prediction 154 176 - -
Tpr3g1358 474 PANTHER TRANSCRIPTION FACTOR TCP24 3 473 - -
Tpr3g1358 474 MobiDBLite consensus disorder prediction 257 277 - -
Tpr3g1358 474 Pfam TCP family transcription factor 48 199 IPR017887 -
Tpr3g1358 474 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g1358 474 ProSiteProfiles R domain profile. 179 199 IPR017888 -
Tpr3g1358 474 MobiDBLite consensus disorder prediction 179 208 - -
Tpr3g1358 474 MobiDBLite consensus disorder prediction 293 312 - -
Tpr3g1358 474 MobiDBLite consensus disorder prediction 317 336 - -
Tpr3g1358 474 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Tpr3g1358 474 MobiDBLite consensus disorder prediction 154 225 - -
Tpr3g1358 474 MobiDBLite consensus disorder prediction 422 452 - -
Tpr3g1358 474 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 473 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1358 Tpr-Chr3 12081591 12089971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1358 29 474 TCP Transcription Factor Family AT4G18390 41.525 3.07e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr3g1358 TCP 9.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1358 - - gmx:100816799 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1358 3 12081591 12089971 Tpr3g1358 3 12081591 12089971 ECH