Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1347 ATGGCGAAGCAGATCCACGAGATCAAGGATTTTCTTCTGACGGCGCGTAGAAAGGACGCGAGATCAGTGAAAATCAAGAGAAGCAAGGATGTGGTGAAGTTCAAGGTTCGTTGCTCGAAGTATTTGTATACACTCTGTGTGTTTGATACTGACAAAGCTGATAAGTTGAAGCAATCTCTTCCTCCTGGTTTGAATGTTCAAGATCTGTAG 210 0.4333 MAKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTDKADKLKQSLPPGLNVQDL* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1347 69 Gene3D - 1 69 IPR038464 -
Tpr3g1347 69 Pfam Ribosomal L38e protein family 3 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Tpr3g1347 69 PANTHER - 1 69 - -
Tpr3g1347 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1347 Tpr-Chr3 11941112 11941803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1347 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.304 2.71e-42 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1347 K02923 - pda:103707748 133.65