Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1336 ATGGAAATTGAAATAATATCAAGAGAATTCATCAAACCCTCATCACCTACTCCTTCTCACCTTAAAAAATTTCCCATCTCTTTCATAGATCACATTACTTTCCGTAACTATGTGCCCCTACTTTTCTTTTACAATGATACCAAAGTTTGTGACCAAACATCAAAAATTTCAAACCTCAAGAATTCCTTAGCTCAAATTCTATCTATATACTACCCCTTTGCAGGCAGGTTCAAAGATCAACTTTCCATCGAATGTAACGATCAAGGTGTGTCATTTCTAGTCGCAAATATCATAGGAACAAAATTATCGACAATACTCCAAAATCCAACTGAAAATGTGCTTAACCCTTTGTTTCCCGATGAATTACAATGGAAGAAAATGGATTGGAATGAAAGTATTTTAGTCATTCAAATCAATTGTTTTGCATGTGGAGGATTCGTAATAAGTGTTTGTGCTTGTCACAAAATTATTGATGCTGCAACCGCTTTCAATTTTATGAACGATTGGGCCAAACTGAACCGTGAAGAAGGAGATTCAAATTCAAAATTTTCATTACCCTACAATTCACTTTATGCGGGAGATACCATTTTTCCACAAGGGAATTTGCCAAATTTTCCGGAAGGCGAGTTTGTGATAGACAAAACAATAGTGTGCAAAAGATTTGTGTTTGAAGCTTCTAAGATAAAGTTACTTAAGAACATGGTAAATTTTGATACACATGCGGTGAAAAATCCCACGCGTGTAGAAGTTGTCACGTCACTGATTTACAAGTGTGTGGTTTCTGTATTGGGATTAAATTACAAAACAACATCACTTCGCATGGCTGTAGATCTTCGCAAAAGAATGGTTCCTCCATTGTCTCAAAAGTGTGTAGGAAACATAGTTTGGTTCTTATTTGTTATGAACCCGGAATTACATGACTTGGTATTCAAAATTAGGCAAGGGTTGTGCGAGTTTCGTGAGGTTTATCCAAAGAAATTTGGAGGGAAAGAAAAAGACTTATCATTTATTTTTGAGTGTCTAAAACAAGTTACTACTTCAGTGTCAGAGAGTAATAGTATTGATCAAAGTTTGATTATGTATGCTAGTTGGTGTAGGTTTCCAATGTATGAAGCTGATTTTGGATGGGGGAAACCGATATGGGTGACAACTAGTGCCTGTCCGGTAAAAAATGCGATAGTTTTGATGGATACAAGAGATGGAGATGGGATTGAAGCGATTGTGAATATGAAAGAAAATGATATGATTATGTTTGAACATGAATTAGAGCTCCTTCAATATGCTTCTTTGAATCCTAGTATTATTGTTGGACATGATGTAGCTAATGGTTTCTAA 1335 0.3551 MEIEIISREFIKPSSPTPSHLKKFPISFIDHITFRNYVPLLFFYNDTKVCDQTSKISNLKNSLAQILSIYYPFAGRFKDQLSIECNDQGVSFLVANIIGTKLSTILQNPTENVLNPLFPDELQWKKMDWNESILVIQINCFACGGFVISVCACHKIIDAATAFNFMNDWAKLNREEGDSNSKFSLPYNSLYAGDTIFPQGNLPNFPEGEFVIDKTIVCKRFVFEASKIKLLKNMVNFDTHAVKNPTRVEVVTSLIYKCVVSVLGLNYKTTSLRMAVDLRKRMVPPLSQKCVGNIVWFLFVMNPELHDLVFKIRQGLCEFREVYPKKFGGKEKDLSFIFECLKQVTTSVSESNSIDQSLIMYASWCRFPMYEADFGWGKPIWVTTSACPVKNAIVLMDTRDGDGIEAIVNMKENDMIMFEHELELLQYASLNPSIIVGHDVANGF* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1336 444 Gene3D - 213 429 IPR023213 -
Tpr3g1336 444 PANTHER F21J9.9 4 435 - -
Tpr3g1336 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 435 - -
Tpr3g1336 444 Gene3D - 1 199 IPR023213 -
Tpr3g1336 444 Pfam Transferase family 1 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1336 Tpr-Chr3 11832645 11834485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1336 1 419 Monolignol Biosynthesis Gene Families AT5G48930 23.060 1.71e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1336 - - gmx:100806928 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1336 3 11832645 11834485 Tpr3g1336 3 11832645 11834485 ECH